Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 MARCH5-201ENST00000358935 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC12.2□□□□□ -0.46
DEFA3P59666 AC055713.1-201ENST00000498967 8279 ntTSL 2 BASIC12.2□□□□□ -0.46
DEFA3P59666 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
DEFA3P59666 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.2□□□□□ -0.46
DEFA3P59666 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC12.2□□□□□ -0.46
DEFA3P59666 AL139011.2-201ENST00000556710 2635 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
DEFA3P59666 RIC8A-203ENST00000526104 3703 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 CPA5-208ENST00000485477 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
DEFA3P59666 ACADL-201ENST00000233710 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA3P59666 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC12.19□□□□□ -0.46
DEFA3P59666 TBC1D14-201ENST00000409757 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA3P59666 LONRF2-201ENST00000393437 13912 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
DEFA3P59666 OTOA-203ENST00000388957 2703 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
DEFA3P59666 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
DEFA3P59666 ELMO1-201ENST00000310758 4022 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA3P59666 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
DEFA3P59666 CEACAM20-206ENST00000621342 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA3P59666 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
DEFA3P59666 AL353593.1-201ENST00000602517 3955 ntBASIC12.19□□□□□ -0.46
DEFA3P59666 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC12.19□□□□□ -0.46
DEFA3P59666 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.19□□□□□ -0.46
DEFA3P59666 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA3P59666 CAMK4-201ENST00000282356 12240 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA3P59666 PTGER3-206ENST00000370924 6982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA3P59666 AP002754.1-201ENST00000506329 2349 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA3P59666 FAS-204ENST00000355740 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA3P59666 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA3P59666 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC12.19□□□□□ -0.46
DEFA3P59666 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA3P59666 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA3P59666 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA3P59666 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.19□□□□□ -0.46
DEFA3P59666 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA3P59666 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA3P59666 KRT18P67-201ENST00000432816 1264 ntBASIC12.19□□□□□ -0.46
DEFA3P59666 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.19□□□□□ -0.46
DEFA3P59666 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC12.19□□□□□ -0.46
DEFA3P59666 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.19□□□□□ -0.46
DEFA3P59666 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.19□□□□□ -0.46
DEFA3P59666 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
DEFA3P59666 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.19□□□□□ -0.46
DEFA3P59666 AC107373.2-201ENST00000607735 490 ntBASIC12.19□□□□□ -0.46
DEFA3P59666 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.19□□□□□ -0.46
DEFA3P59666 BX539320.1-201ENST00000623759 877 ntBASIC12.19□□□□□ -0.46
DEFA3P59666 FAM215A-202ENST00000632077 792 ntBASIC12.19□□□□□ -0.46
DEFA3P59666 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
DEFA3P59666 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA3P59666 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA3P59666 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC12.19□□□□□ -0.46
DEFA3P59666 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.19□□□□□ -0.46
DEFA3P59666 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.19□□□□□ -0.46
DEFA3P59666 C10orf76-202ENST00000370033 4119 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
DEFA3P59666 CDC42BPA-202ENST00000366764 10445 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA3P59666 PISD-203ENST00000397500 2194 ntTSL 5 BASIC12.19□□□□□ -0.46
DEFA3P59666 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA3P59666 CARF-213ENST00000438828 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA3P59666 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA3P59666 ABCC8-201ENST00000302539 4923 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
DEFA3P59666 GLT8D2-201ENST00000360814 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA3P59666 PNPLA6-220ENST00000600737 4195 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
DEFA3P59666 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA3P59666 RABGAP1L-207ENST00000367690 1815 ntTSL 2 BASIC12.18□□□□□ -0.46
DEFA3P59666 FOXJ3-201ENST00000361346 5225 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA3P59666 AC090136.3-201ENST00000520834 2704 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA3P59666 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA3P59666 XAB2-201ENST00000358368 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA3P59666 SOCS2-AS1-201ENST00000499137 3325 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA3P59666 ASTN1-203ENST00000367657 4187 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA3P59666 RAB6A-202ENST00000336083 3085 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA3P59666 ABAT-201ENST00000268251 4836 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA3P59666 AMBRA1-201ENST00000314845 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA3P59666 IKZF4-202ENST00000431367 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA3P59666 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.18□□□□□ -0.46
DEFA3P59666 YPEL2-201ENST00000312655 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA3P59666 CAGE1-201ENST00000296742 2821 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA3P59666 ARHGEF10L-203ENST00000375408 3685 ntTSL 5 BASIC12.18□□□□□ -0.46
DEFA3P59666 SUCLG2-201ENST00000307227 2352 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA3P59666 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC12.18□□□□□ -0.46
DEFA3P59666 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.18□□□□□ -0.46
DEFA3P59666 AGGF1-201ENST00000312916 4509 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA3P59666 CICP9-201ENST00000444451 1913 ntBASIC12.18□□□□□ -0.46
DEFA3P59666 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA3P59666 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA3P59666 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA3P59666 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA3P59666 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.18□□□□□ -0.46
DEFA3P59666 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA3P59666 HMGA1P1-201ENST00000415560 1062 ntBASIC12.18□□□□□ -0.46
DEFA3P59666 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.18□□□□□ -0.46
DEFA3P59666 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC12.18□□□□□ -0.46
DEFA3P59666 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.18□□□□□ -0.46
DEFA3P59666 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
DEFA3P59666 GIMAP3P-201ENST00000495150 836 ntBASIC12.18□□□□□ -0.46
DEFA3P59666 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC12.18□□□□□ -0.46
DEFA3P59666 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.18□□□□□ -0.46
DEFA3P59666 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms