Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 ISCA2P1-201ENST00000425548 448 ntBASIC13.4□□□□□ -0.26
HLCSP50747 XBP1P1-201ENST00000436573 652 ntBASIC13.4□□□□□ -0.26
HLCSP50747 AL353637.1-201ENST00000451571 732 ntBASIC13.4□□□□□ -0.26
HLCSP50747 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HLCSP50747 NUP210P1-202ENST00000504322 710 ntBASIC13.4□□□□□ -0.26
HLCSP50747 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC13.4□□□□□ -0.26
HLCSP50747 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.4□□□□□ -0.26
HLCSP50747 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.4□□□□□ -0.26
HLCSP50747 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.4□□□□□ -0.26
HLCSP50747 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.4□□□□□ -0.26
HLCSP50747 AC084346.2-201ENST00000607097 949 ntBASIC13.4□□□□□ -0.26
HLCSP50747 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.4□□□□□ -0.26
HLCSP50747 AL157813.1-201ENST00000612996 587 ntBASIC13.4□□□□□ -0.26
HLCSP50747 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
HLCSP50747 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLCSP50747 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLCSP50747 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLCSP50747 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC13.4□□□□□ -0.26
HLCSP50747 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLCSP50747 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.4□□□□□ -0.26
HLCSP50747 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLCSP50747 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC13.4□□□□□ -0.26
HLCSP50747 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLCSP50747 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLCSP50747 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLCSP50747 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLCSP50747 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLCSP50747 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLCSP50747 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HLCSP50747 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
HLCSP50747 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
HLCSP50747 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
HLCSP50747 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLCSP50747 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLCSP50747 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLCSP50747 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.39□□□□□ -0.27
HLCSP50747 AC026271.4-201ENST00000578214 1833 ntBASIC13.39□□□□□ -0.27
HLCSP50747 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC13.39□□□□□ -0.27
HLCSP50747 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
HLCSP50747 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLCSP50747 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC13.39□□□□□ -0.27
HLCSP50747 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
HLCSP50747 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLCSP50747 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLCSP50747 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLCSP50747 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLCSP50747 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLCSP50747 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLCSP50747 POU5F1P2-201ENST00000521750 823 ntBASIC13.39□□□□□ -0.27
HLCSP50747 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC13.39□□□□□ -0.27
HLCSP50747 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.39□□□□□ -0.27
HLCSP50747 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
HLCSP50747 AC105129.2-201ENST00000559536 390 ntBASIC13.39□□□□□ -0.27
HLCSP50747 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.39□□□□□ -0.27
HLCSP50747 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.39□□□□□ -0.27
HLCSP50747 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.39□□□□□ -0.27
HLCSP50747 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC13.39□□□□□ -0.27
HLCSP50747 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.39□□□□□ -0.27
HLCSP50747 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
HLCSP50747 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.39□□□□□ -0.27
HLCSP50747 AC060814.4-201ENST00000594169 2163 ntBASIC13.39□□□□□ -0.27
HLCSP50747 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLCSP50747 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.39□□□□□ -0.27
HLCSP50747 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLCSP50747 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLCSP50747 PCDHA6-201ENST00000378126 3267 ntBASIC13.39□□□□□ -0.27
HLCSP50747 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLCSP50747 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC13.39□□□□□ -0.27
HLCSP50747 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.39□□□□□ -0.27
HLCSP50747 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.39□□□□□ -0.27
HLCSP50747 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.39□□□□□ -0.27
HLCSP50747 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLCSP50747 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLCSP50747 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLCSP50747 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
HLCSP50747 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HLCSP50747 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLCSP50747 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.39□□□□□ -0.27
HLCSP50747 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.39□□□□□ -0.27
HLCSP50747 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLCSP50747 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.39□□□□□ -0.27
HLCSP50747 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.39□□□□□ -0.27
HLCSP50747 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLCSP50747 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLCSP50747 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HLCSP50747 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.39□□□□□ -0.27
HLCSP50747 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLCSP50747 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
HLCSP50747 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLCSP50747 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLCSP50747 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLCSP50747 AC115284.2-201ENST00000624646 2054 ntBASIC13.38□□□□□ -0.27
HLCSP50747 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
HLCSP50747 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HLCSP50747 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC13.38□□□□□ -0.27
HLCSP50747 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.38□□□□□ -0.27
HLCSP50747 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.38□□□□□ -0.27
HLCSP50747 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLCSP50747 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HLCSP50747 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms