Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
SSR1P43307 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SSR1P43307 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR1P43307 AHCYP4-201ENST00000419201 1315 ntBASIC14.96□□□□□ -0.01
SSR1P43307 LINC00115-201ENST00000473798 1317 ntBASIC14.96□□□□□ -0.01
SSR1P43307 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
SSR1P43307 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC14.96□□□□□ -0.01
SSR1P43307 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR1P43307 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SSR1P43307 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
SSR1P43307 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SSR1P43307 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR1P43307 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR1P43307 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR1P43307 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC14.96□□□□□ -0.01
SSR1P43307 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
SSR1P43307 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC14.96□□□□□ -0.01
SSR1P43307 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR1P43307 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC14.96□□□□□ -0.01
SSR1P43307 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
SSR1P43307 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR1P43307 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR1P43307 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR1P43307 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR1P43307 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC14.96□□□□□ -0.01
SSR1P43307 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.96□□□□□ -0.01
SSR1P43307 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
SSR1P43307 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.96□□□□□ -0.01
SSR1P43307 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
SSR1P43307 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR1P43307 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.96□□□□□ -0.01
SSR1P43307 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.96□□□□□ -0.01
SSR1P43307 AK2P2-201ENST00000439142 405 ntBASIC14.96□□□□□ -0.01
SSR1P43307 OR2R1P-201ENST00000441404 914 ntBASIC14.96□□□□□ -0.01
SSR1P43307 HSPB1P2-201ENST00000448722 546 ntBASIC14.96□□□□□ -0.01
SSR1P43307 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SSR1P43307 BNIP3P42-201ENST00000454982 569 ntBASIC14.96□□□□□ -0.01
SSR1P43307 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.96□□□□□ -0.01
SSR1P43307 RPSAP36-202ENST00000494591 1261 ntBASIC14.96□□□□□ -0.01
SSR1P43307 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR1P43307 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR1P43307 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.96□□□□□ -0.01
SSR1P43307 MIR4259-201ENST00000584466 101 ntBASIC14.96□□□□□ -0.01
SSR1P43307 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.96□□□□□ -0.01
SSR1P43307 BNIP3P29-201ENST00000598302 571 ntBASIC14.96□□□□□ -0.01
SSR1P43307 AC011447.5-201ENST00000616168 564 ntBASIC14.96□□□□□ -0.01
SSR1P43307 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.96□□□□□ -0.01
SSR1P43307 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
SSR1P43307 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC14.96□□□□□ -0.01
SSR1P43307 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR1P43307 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR1P43307 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR1P43307 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSR1P43307 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.96□□□□□ -0.01
SSR1P43307 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
SSR1P43307 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
SSR1P43307 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
SSR1P43307 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
SSR1P43307 TSN-212ENST00000536142 3328 ntTSL 2 BASIC14.95□□□□□ -0.02
SSR1P43307 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSR1P43307 AC061965.1-201ENST00000560524 1465 ntBASIC14.95□□□□□ -0.02
SSR1P43307 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSR1P43307 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SSR1P43307 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSR1P43307 AL118506.1-201ENST00000601296 3082 ntBASIC14.95□□□□□ -0.02
SSR1P43307 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSR1P43307 NCLP1-201ENST00000445357 1963 ntBASIC14.95□□□□□ -0.02
SSR1P43307 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSR1P43307 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SSR1P43307 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.95□□□□□ -0.02
SSR1P43307 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSR1P43307 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC14.95□□□□□ -0.02
SSR1P43307 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSR1P43307 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSR1P43307 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSR1P43307 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSR1P43307 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
SSR1P43307 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SSR1P43307 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSR1P43307 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.95□□□□□ -0.02
SSR1P43307 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.95□□□□□ -0.02
SSR1P43307 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.95□□□□□ -0.02
SSR1P43307 AC119751.2-201ENST00000504529 210 ntBASIC14.95□□□□□ -0.02
SSR1P43307 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.95□□□□□ -0.02
SSR1P43307 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.95□□□□□ -0.02
SSR1P43307 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSR1P43307 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.95□□□□□ -0.02
SSR1P43307 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.95□□□□□ -0.02
SSR1P43307 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.95□□□□□ -0.02
SSR1P43307 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.95□□□□□ -0.02
SSR1P43307 AL096828.3-201ENST00000615354 462 ntBASIC14.95□□□□□ -0.02
SSR1P43307 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSR1P43307 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSR1P43307 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSR1P43307 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSR1P43307 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SSR1P43307 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SSR1P43307 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SSR1P43307 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.95□□□□□ -0.02
SSR1P43307 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms