Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CXCL5P42830 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CXCL5P42830 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CXCL5P42830 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
CXCL5P42830 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CXCL5P42830 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC9.49□□□□□ -0.89
CXCL5P42830 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
CXCL5P42830 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
CXCL5P42830 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC9.49□□□□□ -0.89
CXCL5P42830 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CXCL5P42830 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC9.48□□□□□ -0.89
CXCL5P42830 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
CXCL5P42830 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
CXCL5P42830 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC9.48□□□□□ -0.89
CXCL5P42830 KDM3A-216ENST00000542128 4311 ntTSL 5 BASIC9.48□□□□□ -0.89
CXCL5P42830 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC9.48□□□□□ -0.89
CXCL5P42830 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC9.48□□□□□ -0.89
CXCL5P42830 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
CXCL5P42830 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC9.48□□□□□ -0.89
CXCL5P42830 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC9.48□□□□□ -0.89
CXCL5P42830 AC025183.3-201ENST00000623526 1482 ntBASIC9.48□□□□□ -0.89
CXCL5P42830 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
CXCL5P42830 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 KLF8-202ENST00000374928 4821 ntTSL 2 BASIC9.48□□□□□ -0.89
CXCL5P42830 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
CXCL5P42830 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
CXCL5P42830 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
CXCL5P42830 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
CXCL5P42830 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 MGST3-203ENST00000367885 680 ntTSL 2 BASIC9.48□□□□□ -0.89
CXCL5P42830 SNX21-203ENST00000372541 771 ntTSL 2 BASIC9.48□□□□□ -0.89
CXCL5P42830 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC9.48□□□□□ -0.89
CXCL5P42830 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC9.48□□□□□ -0.89
CXCL5P42830 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
CXCL5P42830 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC9.48□□□□□ -0.89
CXCL5P42830 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC9.48□□□□□ -0.89
CXCL5P42830 FAM207CP-201ENST00000443486 507 ntBASIC9.48□□□□□ -0.89
CXCL5P42830 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC9.48□□□□□ -0.89
CXCL5P42830 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC9.48□□□□□ -0.89
CXCL5P42830 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 CBFB-203ENST00000561924 584 ntTSL 5 BASIC9.48□□□□□ -0.89
CXCL5P42830 AC025279.2-201ENST00000569730 653 ntBASIC9.48□□□□□ -0.89
CXCL5P42830 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC9.48□□□□□ -0.89
CXCL5P42830 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC9.48□□□□□ -0.89
CXCL5P42830 RN7SL713P-201ENST00000582127 302 ntBASIC9.48□□□□□ -0.89
CXCL5P42830 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC9.48□□□□□ -0.89
CXCL5P42830 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC9.48□□□□□ -0.89
CXCL5P42830 LINC02084-201ENST00000606069 1096 ntBASIC9.48□□□□□ -0.89
CXCL5P42830 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC9.48□□□□□ -0.89
CXCL5P42830 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
CXCL5P42830 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
CXCL5P42830 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC9.48□□□□□ -0.89
CXCL5P42830 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC9.48□□□□□ -0.89
CXCL5P42830 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
CXCL5P42830 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC9.48□□□□□ -0.89
CXCL5P42830 SHMT1P1-201ENST00000419974 1312 ntBASIC9.48□□□□□ -0.89
CXCL5P42830 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC9.48□□□□□ -0.89
CXCL5P42830 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC9.48□□□□□ -0.89
CXCL5P42830 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC9.48□□□□□ -0.89
CXCL5P42830 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC9.48□□□□□ -0.89
CXCL5P42830 SALL4P6-201ENST00000429385 1691 ntBASIC9.48□□□□□ -0.89
CXCL5P42830 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC9.48□□□□□ -0.89
CXCL5P42830 PEX5L-208ENST00000467460 9082 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC9.48□□□□□ -0.89
CXCL5P42830 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 SHC1P1-201ENST00000425230 1745 ntBASIC9.48□□□□□ -0.89
CXCL5P42830 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC9.48□□□□□ -0.89
CXCL5P42830 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
CXCL5P42830 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
CXCL5P42830 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CXCL5P42830 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
CXCL5P42830 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
CXCL5P42830 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CXCL5P42830 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
CXCL5P42830 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CXCL5P42830 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms