Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
CEACAM3P40198 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CEACAM3P40198 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CEACAM3P40198 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
CEACAM3P40198 GALC-206ENST00000544807 2528 ntTSL 2 BASIC11.45□□□□□ -0.58
CEACAM3P40198 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CEACAM3P40198 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CEACAM3P40198 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CEACAM3P40198 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CEACAM3P40198 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CEACAM3P40198 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
CEACAM3P40198 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
CEACAM3P40198 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CEACAM3P40198 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CEACAM3P40198 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
CEACAM3P40198 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CEACAM3P40198 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CEACAM3P40198 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CEACAM3P40198 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC11.45□□□□□ -0.58
CEACAM3P40198 CMC1-204ENST00000423894 549 ntTSL 2 BASIC11.45□□□□□ -0.58
CEACAM3P40198 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC11.45□□□□□ -0.58
CEACAM3P40198 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CEACAM3P40198 NAGK-204ENST00000443872 878 ntTSL 3 BASIC11.45□□□□□ -0.58
CEACAM3P40198 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC11.45□□□□□ -0.58
CEACAM3P40198 AP000358.1-201ENST00000456260 156 ntBASIC11.45□□□□□ -0.58
CEACAM3P40198 TMEM198B-204ENST00000484016 896 ntBASIC11.45□□□□□ -0.58
CEACAM3P40198 NUP210P1-202ENST00000504322 710 ntBASIC11.45□□□□□ -0.58
CEACAM3P40198 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CEACAM3P40198 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CEACAM3P40198 RTN3P1-201ENST00000536295 711 ntBASIC11.45□□□□□ -0.58
CEACAM3P40198 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC11.45□□□□□ -0.58
CEACAM3P40198 NDUFB10P1-201ENST00000567319 521 ntBASIC11.45□□□□□ -0.58
CEACAM3P40198 MIR4754-201ENST00000582477 89 ntBASIC11.45□□□□□ -0.58
CEACAM3P40198 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC11.45□□□□□ -0.58
CEACAM3P40198 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC11.45□□□□□ -0.58
CEACAM3P40198 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC11.45□□□□□ -0.58
CEACAM3P40198 AL109837.1-201ENST00000603272 613 ntBASIC11.45□□□□□ -0.58
CEACAM3P40198 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CEACAM3P40198 AL139424.3-202ENST00000641619 917 ntBASIC11.45□□□□□ -0.58
CEACAM3P40198 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
CEACAM3P40198 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
CEACAM3P40198 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
CEACAM3P40198 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CEACAM3P40198 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CEACAM3P40198 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
CEACAM3P40198 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
CEACAM3P40198 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CEACAM3P40198 AC092117.1-201ENST00000621230 3250 ntBASIC11.45□□□□□ -0.58
CEACAM3P40198 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CEACAM3P40198 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC11.45□□□□□ -0.58
CEACAM3P40198 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CEACAM3P40198 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC11.45□□□□□ -0.58
CEACAM3P40198 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC11.44□□□□□ -0.58
CEACAM3P40198 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
CEACAM3P40198 KRT8P31-201ENST00000504812 1408 ntBASIC11.44□□□□□ -0.58
CEACAM3P40198 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC11.44□□□□□ -0.58
CEACAM3P40198 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
CEACAM3P40198 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
CEACAM3P40198 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC11.44□□□□□ -0.58
CEACAM3P40198 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC11.44□□□□□ -0.58
CEACAM3P40198 SAT1-201ENST00000379251 801 ntTSL 2 BASIC11.44□□□□□ -0.58
CEACAM3P40198 SAT1-202ENST00000379253 909 ntTSL 2 BASIC11.44□□□□□ -0.58
CEACAM3P40198 SAT1-203ENST00000379254 868 ntTSL 3 BASIC11.44□□□□□ -0.58
CEACAM3P40198 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 AL583805.1-201ENST00000391389 531 ntBASIC11.44□□□□□ -0.58
CEACAM3P40198 BCYRN1-201ENST00000418539 200 ntBASIC11.44□□□□□ -0.58
CEACAM3P40198 PDIA3P2-201ENST00000428073 158 ntBASIC11.44□□□□□ -0.58
CEACAM3P40198 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC11.44□□□□□ -0.58
CEACAM3P40198 AC098934.1-203ENST00000442868 1262 ntBASIC11.44□□□□□ -0.58
CEACAM3P40198 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC11.44□□□□□ -0.58
CEACAM3P40198 AC005740.1-201ENST00000515639 522 ntBASIC11.44□□□□□ -0.58
CEACAM3P40198 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC11.44□□□□□ -0.58
CEACAM3P40198 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC11.44□□□□□ -0.58
CEACAM3P40198 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC11.44□□□□□ -0.58
CEACAM3P40198 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC11.44□□□□□ -0.58
CEACAM3P40198 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 AL133467.4-201ENST00000602953 725 ntBASIC11.44□□□□□ -0.58
CEACAM3P40198 AC007326.1-201ENST00000604539 458 ntBASIC11.44□□□□□ -0.58
CEACAM3P40198 AL021707.6-201ENST00000609212 491 ntBASIC11.44□□□□□ -0.58
CEACAM3P40198 AC015967.2-201ENST00000624092 234 ntBASIC11.44□□□□□ -0.58
CEACAM3P40198 AC006435.4-201ENST00000625037 234 ntBASIC11.44□□□□□ -0.58
CEACAM3P40198 AL356737.1-201ENST00000634391 234 ntBASIC11.44□□□□□ -0.58
CEACAM3P40198 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
CEACAM3P40198 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
CEACAM3P40198 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC11.44□□□□□ -0.58
CEACAM3P40198 AC068760.1-201ENST00000493579 1953 ntBASIC11.44□□□□□ -0.58
CEACAM3P40198 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CEACAM3P40198 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms