Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 VDAC1P1-201ENST00000439229 848 ntBASIC15.3■□□□□ 0.04
KRT9P35527 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.3■□□□□ 0.04
KRT9P35527 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.3■□□□□ 0.04
KRT9P35527 GOLGA2P8-201ENST00000505201 779 ntBASIC15.3■□□□□ 0.04
KRT9P35527 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15.3■□□□□ 0.04
KRT9P35527 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
KRT9P35527 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.3■□□□□ 0.04
KRT9P35527 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.3■□□□□ 0.04
KRT9P35527 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC15.3■□□□□ 0.04
KRT9P35527 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.3■□□□□ 0.04
KRT9P35527 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
KRT9P35527 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC15.3■□□□□ 0.04
KRT9P35527 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC15.3■□□□□ 0.04
KRT9P35527 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT9P35527 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
KRT9P35527 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.3■□□□□ 0.04
KRT9P35527 ZNF493-208ENST00000599461 1769 ntBASIC15.3■□□□□ 0.04
KRT9P35527 AC005695.3-201ENST00000614522 232 ntBASIC15.3■□□□□ 0.04
KRT9P35527 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.3■□□□□ 0.04
KRT9P35527 AL136295.7-201ENST00000619226 1200 ntBASIC15.3■□□□□ 0.04
KRT9P35527 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
KRT9P35527 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.3■□□□□ 0.04
KRT9P35527 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KRT9P35527 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
KRT9P35527 AL139158.3-201ENST00000641212 1562 ntBASIC15.3■□□□□ 0.04
KRT9P35527 AC004923.1-202ENST00000642106 209 ntBASIC15.3■□□□□ 0.04
KRT9P35527 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT9P35527 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT9P35527 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT9P35527 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC15.3■□□□□ 0.04
KRT9P35527 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KRT9P35527 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KRT9P35527 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
KRT9P35527 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
KRT9P35527 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT9P35527 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT9P35527 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT9P35527 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT9P35527 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT9P35527 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT9P35527 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT9P35527 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT9P35527 AC018629.1-201ENST00000623381 1736 ntBASIC15.29■□□□□ 0.04
KRT9P35527 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT9P35527 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT9P35527 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT9P35527 RPL13AP3-202ENST00000494676 1473 ntBASIC15.29■□□□□ 0.04
KRT9P35527 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT9P35527 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT9P35527 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT9P35527 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT9P35527 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.29■□□□□ 0.04
KRT9P35527 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT9P35527 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
KRT9P35527 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
KRT9P35527 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT9P35527 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.29■□□□□ 0.04
KRT9P35527 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC15.29■□□□□ 0.04
KRT9P35527 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT9P35527 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT9P35527 BRWD1P1-201ENST00000401091 371 ntBASIC15.29■□□□□ 0.04
KRT9P35527 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT9P35527 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT9P35527 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT9P35527 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT9P35527 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT9P35527 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.29■□□□□ 0.04
KRT9P35527 HLA-J-204ENST00000495278 958 ntBASIC15.29■□□□□ 0.04
KRT9P35527 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.29■□□□□ 0.04
KRT9P35527 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.29■□□□□ 0.04
KRT9P35527 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.29■□□□□ 0.04
KRT9P35527 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.29■□□□□ 0.04
KRT9P35527 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT9P35527 AC022748.3-201ENST00000621828 275 ntBASIC15.29■□□□□ 0.04
KRT9P35527 DDX5-235ENST00000630471 473 ntTSL 4 BASIC15.29■□□□□ 0.04
KRT9P35527 AC092299.1-201ENST00000632679 757 ntBASIC15.29■□□□□ 0.04
KRT9P35527 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT9P35527 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT9P35527 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
KRT9P35527 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT9P35527 PPP1R26P2-201ENST00000611403 3595 ntBASIC15.29■□□□□ 0.04
KRT9P35527 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
KRT9P35527 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT9P35527 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC15.29■□□□□ 0.04
KRT9P35527 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT9P35527 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
KRT9P35527 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT9P35527 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
KRT9P35527 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT9P35527 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
KRT9P35527 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT9P35527 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC15.29■□□□□ 0.04
KRT9P35527 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
KRT9P35527 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
KRT9P35527 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
KRT9P35527 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT9P35527 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KRT9P35527 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KRT9P35527 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
KRT9P35527 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms