Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RN7SKP155-201ENST00000516031 288 ntBASIC16.16■□□□□ 0.18
ERCC3P19447 TREHP1-201ENST00000531328 465 ntBASIC16.16■□□□□ 0.18
ERCC3P19447 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
ERCC3P19447 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC3P19447 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC16.16■□□□□ 0.18
ERCC3P19447 AL132994.1-201ENST00000554098 400 ntBASIC16.16■□□□□ 0.18
ERCC3P19447 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC16.16■□□□□ 0.18
ERCC3P19447 DNM1P51-201ENST00000558149 522 ntBASIC16.16■□□□□ 0.18
ERCC3P19447 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC16.16■□□□□ 0.18
ERCC3P19447 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC16.16■□□□□ 0.18
ERCC3P19447 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC16.16■□□□□ 0.18
ERCC3P19447 TRMT112P3-201ENST00000580149 358 ntBASIC16.16■□□□□ 0.18
ERCC3P19447 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC3P19447 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
ERCC3P19447 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC3P19447 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
ERCC3P19447 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC3P19447 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC3P19447 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC16.16■□□□□ 0.18
ERCC3P19447 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC16.16■□□□□ 0.18
ERCC3P19447 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC3P19447 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC3P19447 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ERCC3P19447 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
ERCC3P19447 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC3P19447 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC3P19447 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC16.16■□□□□ 0.18
ERCC3P19447 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC3P19447 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ERCC3P19447 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ERCC3P19447 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC3P19447 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ERCC3P19447 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC3P19447 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC3P19447 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC3P19447 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC3P19447 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC3P19447 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC16.15■□□□□ 0.18
ERCC3P19447 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
ERCC3P19447 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC3P19447 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC16.15■□□□□ 0.18
ERCC3P19447 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ERCC3P19447 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC16.15■□□□□ 0.18
ERCC3P19447 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
ERCC3P19447 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC3P19447 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC3P19447 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC3P19447 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
ERCC3P19447 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC3P19447 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
ERCC3P19447 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC16.15■□□□□ 0.18
ERCC3P19447 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.15■□□□□ 0.18
ERCC3P19447 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC3P19447 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC16.15■□□□□ 0.18
ERCC3P19447 PRSS3P1-201ENST00000503996 742 ntBASIC16.15■□□□□ 0.18
ERCC3P19447 FAM86B3P-203ENST00000523992 854 ntBASIC16.15■□□□□ 0.18
ERCC3P19447 AC013553.1-201ENST00000560906 267 ntBASIC16.15■□□□□ 0.18
ERCC3P19447 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
ERCC3P19447 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC16.15■□□□□ 0.18
ERCC3P19447 AL009176.1-201ENST00000607876 650 ntBASIC16.15■□□□□ 0.18
ERCC3P19447 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC16.15■□□□□ 0.18
ERCC3P19447 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC3P19447 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC3P19447 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC3P19447 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC3P19447 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC16.15■□□□□ 0.18
ERCC3P19447 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC3P19447 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC3P19447 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ERCC3P19447 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ERCC3P19447 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
ERCC3P19447 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC16.15■□□□□ 0.18
ERCC3P19447 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
ERCC3P19447 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC16.15■□□□□ 0.18
ERCC3P19447 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.18
ERCC3P19447 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.18
ERCC3P19447 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
ERCC3P19447 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC16.14■□□□□ 0.18
ERCC3P19447 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC3P19447 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC16.14■□□□□ 0.17
ERCC3P19447 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC3P19447 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC3P19447 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC16.14■□□□□ 0.17
ERCC3P19447 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16.14■□□□□ 0.17
ERCC3P19447 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC3P19447 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.14■□□□□ 0.17
ERCC3P19447 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC3P19447 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC3P19447 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC3P19447 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
ERCC3P19447 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC3P19447 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC3P19447 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC3P19447 OR7E115P-201ENST00000382617 1024 ntBASIC16.14■□□□□ 0.17
ERCC3P19447 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ERCC3P19447 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC16.14■□□□□ 0.17
ERCC3P19447 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC16.14■□□□□ 0.17
ERCC3P19447 STK24P1-201ENST00000455035 1291 ntBASIC16.14■□□□□ 0.17
ERCC3P19447 RN7SL582P-201ENST00000491078 279 ntBASIC16.14■□□□□ 0.17
ERCC3P19447 EEF1GP8-201ENST00000506566 1154 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms