Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 BCYRN1-201ENST00000418539 200 ntBASIC14.33□□□□□ -0.12
ERCC2P18074 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC2P18074 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC14.33□□□□□ -0.12
ERCC2P18074 AC007279.1-201ENST00000448547 837 ntBASIC14.33□□□□□ -0.12
ERCC2P18074 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC14.33□□□□□ -0.12
ERCC2P18074 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.33□□□□□ -0.12
ERCC2P18074 SCARNA12-201ENST00000459155 270 ntBASIC14.33□□□□□ -0.12
ERCC2P18074 NDUFS6P1-201ENST00000485187 316 ntBASIC14.33□□□□□ -0.12
ERCC2P18074 IMP3P2-201ENST00000489760 475 ntBASIC14.33□□□□□ -0.12
ERCC2P18074 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC2P18074 COQ10BP2-201ENST00000513804 724 ntBASIC14.33□□□□□ -0.12
ERCC2P18074 IGLV3-15-201ENST00000518356 244 ntBASIC14.33□□□□□ -0.12
ERCC2P18074 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC14.33□□□□□ -0.12
ERCC2P18074 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.33□□□□□ -0.12
ERCC2P18074 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC14.33□□□□□ -0.12
ERCC2P18074 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.33□□□□□ -0.12
ERCC2P18074 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
ERCC2P18074 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC2P18074 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC2P18074 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC14.33□□□□□ -0.12
ERCC2P18074 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC2P18074 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC2P18074 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC2P18074 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
ERCC2P18074 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC2P18074 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC2P18074 AL358781.1-202ENST00000321081 1360 ntBASIC14.33□□□□□ -0.12
ERCC2P18074 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
ERCC2P18074 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC2P18074 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ERCC2P18074 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERCC2P18074 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC2P18074 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC2P18074 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ERCC2P18074 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC2P18074 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC2P18074 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC2P18074 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ERCC2P18074 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC2P18074 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC2P18074 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC2P18074 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC2P18074 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
ERCC2P18074 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC14.32□□□□□ -0.12
ERCC2P18074 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.32□□□□□ -0.12
ERCC2P18074 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC2P18074 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.32□□□□□ -0.12
ERCC2P18074 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC2P18074 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ERCC2P18074 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC2P18074 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.32□□□□□ -0.12
ERCC2P18074 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC14.32□□□□□ -0.12
ERCC2P18074 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC2P18074 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC2P18074 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC2P18074 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC14.32□□□□□ -0.12
ERCC2P18074 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC2P18074 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC2P18074 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ERCC2P18074 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC2P18074 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
ERCC2P18074 AL627231.1-201ENST00000394467 1125 ntBASIC14.32□□□□□ -0.12
ERCC2P18074 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.32□□□□□ -0.12
ERCC2P18074 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC14.32□□□□□ -0.12
ERCC2P18074 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC14.32□□□□□ -0.12
ERCC2P18074 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC14.32□□□□□ -0.12
ERCC2P18074 AC234782.1-201ENST00000451950 919 ntBASIC14.32□□□□□ -0.12
ERCC2P18074 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.32□□□□□ -0.12
ERCC2P18074 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.32□□□□□ -0.12
ERCC2P18074 AC134698.3-201ENST00000523880 214 ntBASIC14.32□□□□□ -0.12
ERCC2P18074 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.32□□□□□ -0.12
ERCC2P18074 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.32□□□□□ -0.12
ERCC2P18074 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC14.32□□□□□ -0.12
ERCC2P18074 AL133499.1-201ENST00000596207 608 ntBASIC14.32□□□□□ -0.12
ERCC2P18074 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.32□□□□□ -0.12
ERCC2P18074 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
ERCC2P18074 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC2P18074 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC2P18074 AC245140.2-201ENST00000624054 1939 ntBASIC14.32□□□□□ -0.12
ERCC2P18074 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC2P18074 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC14.32□□□□□ -0.12
ERCC2P18074 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC14.32□□□□□ -0.12
ERCC2P18074 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.32□□□□□ -0.12
ERCC2P18074 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC2P18074 PDXDC2P-206ENST00000534700 1315 ntBASIC14.32□□□□□ -0.12
ERCC2P18074 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
ERCC2P18074 AC040160.2-201ENST00000623816 1675 ntBASIC14.32□□□□□ -0.12
ERCC2P18074 AC079781.5-202ENST00000641784 3743 ntBASIC14.32□□□□□ -0.12
ERCC2P18074 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.32□□□□□ -0.12
ERCC2P18074 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC14.32□□□□□ -0.12
ERCC2P18074 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
ERCC2P18074 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ERCC2P18074 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.32□□□□□ -0.12
ERCC2P18074 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ERCC2P18074 DMBT1P1-203ENST00000636837 4628 ntBASIC14.32□□□□□ -0.12
ERCC2P18074 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
ERCC2P18074 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ERCC2P18074 RCC2P5-201ENST00000492126 1487 ntBASIC14.31□□□□□ -0.12
ERCC2P18074 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
ERCC2P18074 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms