Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DOBP13765 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.52□□□□□ -0.41
HLA-DOBP13765 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.52□□□□□ -0.41
HLA-DOBP13765 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DOBP13765 AC020917.4-201ENST00000623994 1999 ntBASIC12.52□□□□□ -0.41
HLA-DOBP13765 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DOBP13765 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DOBP13765 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DOBP13765 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DOBP13765 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.52□□□□□ -0.41
HLA-DOBP13765 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DOBP13765 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC12.52□□□□□ -0.41
HLA-DOBP13765 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.52□□□□□ -0.41
HLA-DOBP13765 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
HLA-DOBP13765 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DOBP13765 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.52□□□□□ -0.41
HLA-DOBP13765 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DOBP13765 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DOBP13765 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
HLA-DOBP13765 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
HLA-DOBP13765 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DOBP13765 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DOBP13765 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DOBP13765 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DOBP13765 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DOBP13765 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 AC108024.1-201ENST00000626286 1721 ntBASIC12.51□□□□□ -0.41
HLA-DOBP13765 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DOBP13765 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DOBP13765 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DOBP13765 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DOBP13765 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DOBP13765 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DOBP13765 MIR769-201ENST00000390225 118 ntBASIC12.51□□□□□ -0.41
HLA-DOBP13765 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.51□□□□□ -0.41
HLA-DOBP13765 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DOBP13765 PDIA3P2-201ENST00000428073 158 ntBASIC12.51□□□□□ -0.41
HLA-DOBP13765 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 AC005077.2-201ENST00000449786 690 ntBASIC12.51□□□□□ -0.41
HLA-DOBP13765 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DOBP13765 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 AC024681.1-201ENST00000521917 487 ntBASIC12.51□□□□□ -0.41
HLA-DOBP13765 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 IRF3-215ENST00000596822 823 ntTSL 3 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DOBP13765 AL133467.4-201ENST00000602953 725 ntBASIC12.51□□□□□ -0.41
HLA-DOBP13765 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DOBP13765 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DOBP13765 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DOBP13765 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DOBP13765 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DOBP13765 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DOBP13765 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DOBP13765 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DOBP13765 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HLA-DOBP13765 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.51□□□□□ -0.41
HLA-DOBP13765 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DOBP13765 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DOBP13765 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.5□□□□□ -0.41
HLA-DOBP13765 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
HLA-DOBP13765 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DOBP13765 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DOBP13765 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DOBP13765 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DOBP13765 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DOBP13765 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
HLA-DOBP13765 MANEA-AS1-201ENST00000564541 2268 ntBASIC12.5□□□□□ -0.41
HLA-DOBP13765 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DOBP13765 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC12.5□□□□□ -0.41
HLA-DOBP13765 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.5□□□□□ -0.41
HLA-DOBP13765 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
HLA-DOBP13765 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DOBP13765 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DOBP13765 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DOBP13765 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms