Protein–RNA interactions for Protein: P10147

CCL3, C-C motif chemokine 3, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3P10147 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3P10147 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3P10147 AL365181.1-201ENST00000564032 1828 ntBASIC12.63□□□□□ -0.39
CCL3P10147 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CCL3P10147 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CCL3P10147 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3P10147 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3P10147 BAK1P1-201ENST00000317045 636 ntBASIC12.63□□□□□ -0.39
CCL3P10147 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3P10147 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3P10147 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
CCL3P10147 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CCL3P10147 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC12.63□□□□□ -0.39
CCL3P10147 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CCL3P10147 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC12.63□□□□□ -0.39
CCL3P10147 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL3P10147 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.63□□□□□ -0.39
CCL3P10147 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC12.63□□□□□ -0.39
CCL3P10147 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL3P10147 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3P10147 MIR3940-201ENST00000579148 102 ntBASIC12.63□□□□□ -0.39
CCL3P10147 RN7SL556P-201ENST00000582856 298 ntBASIC12.63□□□□□ -0.39
CCL3P10147 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC12.63□□□□□ -0.39
CCL3P10147 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC12.63□□□□□ -0.39
CCL3P10147 AC138466.5-201ENST00000624002 808 ntBASIC12.63□□□□□ -0.39
CCL3P10147 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
CCL3P10147 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3P10147 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC12.63□□□□□ -0.39
CCL3P10147 RCC2P5-201ENST00000492126 1487 ntBASIC12.63□□□□□ -0.39
CCL3P10147 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CCL3P10147 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3P10147 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3P10147 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3P10147 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3P10147 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.63□□□□□ -0.39
CCL3P10147 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.63□□□□□ -0.39
CCL3P10147 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CCL3P10147 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3P10147 CTBP2P8-201ENST00000422584 1330 ntBASIC12.62□□□□□ -0.39
CCL3P10147 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL3P10147 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3P10147 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CCL3P10147 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CCL3P10147 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3P10147 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3P10147 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3P10147 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL3P10147 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3P10147 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL3P10147 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.62□□□□□ -0.39
CCL3P10147 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3P10147 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL3P10147 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL3P10147 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3P10147 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3P10147 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3P10147 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3P10147 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CCL3P10147 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL3P10147 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC12.62□□□□□ -0.39
CCL3P10147 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC12.62□□□□□ -0.39
CCL3P10147 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3P10147 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
CCL3P10147 AC009084.3-201ENST00000623356 437 ntBASIC12.62□□□□□ -0.39
CCL3P10147 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CCL3P10147 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3P10147 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3P10147 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.62□□□□□ -0.39
CCL3P10147 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL3P10147 AC005014.1-201ENST00000432006 2976 ntBASIC12.62□□□□□ -0.39
CCL3P10147 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3P10147 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL3P10147 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL3P10147 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3P10147 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL3P10147 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL3P10147 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3P10147 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3P10147 CYP51A1P3-201ENST00000400072 1428 ntBASIC12.62□□□□□ -0.39
CCL3P10147 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3P10147 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.62□□□□□ -0.39
CCL3P10147 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3P10147 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3P10147 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3P10147 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.62□□□□□ -0.39
CCL3P10147 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CCL3P10147 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CCL3P10147 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3P10147 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3P10147 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.61□□□□□ -0.39
CCL3P10147 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CCL3P10147 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CCL3P10147 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3P10147 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3P10147 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CCL3P10147 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.61□□□□□ -0.39
CCL3P10147 AC131212.3-201ENST00000624087 4219 ntBASIC12.61□□□□□ -0.39
CCL3P10147 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3P10147 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CCL3P10147 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms