Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HLA-DOAP06340 OS9-207ENST00000439210 1946 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DOAP06340 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DOAP06340 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DOAP06340 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
HLA-DOAP06340 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DOAP06340 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DOAP06340 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DOAP06340 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DOAP06340 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
HLA-DOAP06340 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HLA-DOAP06340 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC16.29■□□□□ 0.2
HLA-DOAP06340 AC026470.1-201ENST00000478038 846 ntBASIC16.29■□□□□ 0.2
HLA-DOAP06340 TBC1D3P6-201ENST00000505954 962 ntBASIC16.29■□□□□ 0.2
HLA-DOAP06340 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC16.29■□□□□ 0.2
HLA-DOAP06340 EHF-208ENST00000530286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DOAP06340 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC16.29■□□□□ 0.2
HLA-DOAP06340 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC16.29■□□□□ 0.2
HLA-DOAP06340 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC16.29■□□□□ 0.2
HLA-DOAP06340 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC16.29■□□□□ 0.2
HLA-DOAP06340 AL359219.1-201ENST00000556311 934 ntBASIC16.29■□□□□ 0.2
HLA-DOAP06340 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC16.29■□□□□ 0.2
HLA-DOAP06340 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DOAP06340 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC16.29■□□□□ 0.2
HLA-DOAP06340 THY1-209ENST00000580275 578 ntTSL 3 BASIC16.29■□□□□ 0.2
HLA-DOAP06340 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DOAP06340 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HLA-DOAP06340 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC16.29■□□□□ 0.2
HLA-DOAP06340 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC16.29■□□□□ 0.2
HLA-DOAP06340 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DOAP06340 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DOAP06340 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DOAP06340 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DOAP06340 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DOAP06340 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DOAP06340 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DOAP06340 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DOAP06340 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HLA-DOAP06340 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
HLA-DOAP06340 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DOAP06340 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DOAP06340 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DOAP06340 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HLA-DOAP06340 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DOAP06340 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HLA-DOAP06340 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DOAP06340 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HLA-DOAP06340 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DOAP06340 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DOAP06340 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DOAP06340 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DOAP06340 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HLA-DOAP06340 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DOAP06340 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DOAP06340 AC022080.1-201ENST00000366255 781 ntBASIC16.28■□□□□ 0.2
HLA-DOAP06340 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DOAP06340 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC16.28■□□□□ 0.2
HLA-DOAP06340 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DOAP06340 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC16.28■□□□□ 0.2
HLA-DOAP06340 AC104212.2-201ENST00000478813 628 ntBASIC16.28■□□□□ 0.2
HLA-DOAP06340 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DOAP06340 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC16.28■□□□□ 0.2
HLA-DOAP06340 AC087203.1-201ENST00000532111 1181 ntBASIC16.28■□□□□ 0.2
HLA-DOAP06340 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DOAP06340 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC16.28■□□□□ 0.2
HLA-DOAP06340 AC126755.5-201ENST00000622756 267 ntBASIC16.28■□□□□ 0.2
HLA-DOAP06340 AP000769.1-203ENST00000637245 208 ntBASIC16.28■□□□□ 0.2
HLA-DOAP06340 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DOAP06340 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DOAP06340 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HLA-DOAP06340 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
HLA-DOAP06340 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DOAP06340 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC16.28■□□□□ 0.2
HLA-DOAP06340 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HLA-DOAP06340 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DOAP06340 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC16.28■□□□□ 0.2
HLA-DOAP06340 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HLA-DOAP06340 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DOAP06340 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DOAP06340 RCC2P5-201ENST00000492126 1487 ntBASIC16.28■□□□□ 0.2
HLA-DOAP06340 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
HLA-DOAP06340 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
HLA-DOAP06340 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DOAP06340 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HLA-DOAP06340 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.28■□□□□ 0.2
HLA-DOAP06340 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DOAP06340 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HLA-DOAP06340 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DOAP06340 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
HLA-DOAP06340 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC16.27■□□□□ 0.2
HLA-DOAP06340 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DOAP06340 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DOAP06340 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DOAP06340 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DOAP06340 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HLA-DOAP06340 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DOAP06340 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HLA-DOAP06340 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HLA-DOAP06340 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
HLA-DOAP06340 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms