Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
POLR3DP05423 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
POLR3DP05423 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
POLR3DP05423 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC16.66■□□□□ 0.26
POLR3DP05423 AC092573.1-201ENST00000433054 884 ntBASIC16.66■□□□□ 0.26
POLR3DP05423 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC16.66■□□□□ 0.26
POLR3DP05423 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC16.66■□□□□ 0.26
POLR3DP05423 RN7SL375P-201ENST00000492442 298 ntBASIC16.66■□□□□ 0.26
POLR3DP05423 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC16.66■□□□□ 0.26
POLR3DP05423 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC16.66■□□□□ 0.26
POLR3DP05423 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
POLR3DP05423 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC16.66■□□□□ 0.26
POLR3DP05423 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC16.66■□□□□ 0.26
POLR3DP05423 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
POLR3DP05423 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
POLR3DP05423 BAP1-211ENST00000615113 489 ntBASIC16.66■□□□□ 0.26
POLR3DP05423 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
POLR3DP05423 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
POLR3DP05423 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
POLR3DP05423 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
POLR3DP05423 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
POLR3DP05423 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.66■□□□□ 0.26
POLR3DP05423 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
POLR3DP05423 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
POLR3DP05423 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC16.66■□□□□ 0.26
POLR3DP05423 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
POLR3DP05423 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
POLR3DP05423 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
POLR3DP05423 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
POLR3DP05423 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
POLR3DP05423 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLR3DP05423 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLR3DP05423 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLR3DP05423 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLR3DP05423 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
POLR3DP05423 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLR3DP05423 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC16.65■□□□□ 0.26
POLR3DP05423 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLR3DP05423 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLR3DP05423 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
POLR3DP05423 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLR3DP05423 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLR3DP05423 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
POLR3DP05423 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC16.65■□□□□ 0.26
POLR3DP05423 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC16.65■□□□□ 0.26
POLR3DP05423 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLR3DP05423 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
POLR3DP05423 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
POLR3DP05423 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC16.65■□□□□ 0.26
POLR3DP05423 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC16.65■□□□□ 0.26
POLR3DP05423 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC16.65■□□□□ 0.26
POLR3DP05423 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC16.65■□□□□ 0.26
POLR3DP05423 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
POLR3DP05423 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC16.65■□□□□ 0.26
POLR3DP05423 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC16.65■□□□□ 0.26
POLR3DP05423 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC16.65■□□□□ 0.26
POLR3DP05423 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
POLR3DP05423 AL132780.4-201ENST00000624870 1135 ntBASIC16.65■□□□□ 0.26
POLR3DP05423 ST5-261ENST00000626808 1071 ntTSL 5 BASIC16.65■□□□□ 0.26
POLR3DP05423 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC16.65■□□□□ 0.26
POLR3DP05423 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC16.65■□□□□ 0.26
POLR3DP05423 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
POLR3DP05423 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC16.65■□□□□ 0.26
POLR3DP05423 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLR3DP05423 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLR3DP05423 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
POLR3DP05423 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC16.65■□□□□ 0.26
POLR3DP05423 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLR3DP05423 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
POLR3DP05423 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
POLR3DP05423 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
POLR3DP05423 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC16.65■□□□□ 0.26
POLR3DP05423 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
POLR3DP05423 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
POLR3DP05423 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
POLR3DP05423 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.26
POLR3DP05423 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.26
POLR3DP05423 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC16.64■□□□□ 0.26
POLR3DP05423 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
POLR3DP05423 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
POLR3DP05423 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
POLR3DP05423 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
POLR3DP05423 AC105206.1-202ENST00000314927 2368 ntBASIC16.64■□□□□ 0.25
POLR3DP05423 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
POLR3DP05423 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
POLR3DP05423 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
POLR3DP05423 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
POLR3DP05423 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
POLR3DP05423 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
POLR3DP05423 RNVU1-8-201ENST00000364272 125 ntBASIC16.64■□□□□ 0.25
POLR3DP05423 OR52M2P-201ENST00000414298 959 ntBASIC16.64■□□□□ 0.25
POLR3DP05423 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC16.64■□□□□ 0.25
POLR3DP05423 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC16.64■□□□□ 0.25
POLR3DP05423 PIN4P1-201ENST00000451079 396 ntBASIC16.64■□□□□ 0.25
POLR3DP05423 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.64■□□□□ 0.25
POLR3DP05423 RN7SKP155-201ENST00000516031 288 ntBASIC16.64■□□□□ 0.25
POLR3DP05423 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.64■□□□□ 0.25
POLR3DP05423 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC16.64■□□□□ 0.25
POLR3DP05423 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.64■□□□□ 0.25
POLR3DP05423 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms