Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CAPNS1P04632 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.91□□□□□ -0.18
CAPNS1P04632 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CAPNS1P04632 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CAPNS1P04632 AL139385.1-201ENST00000611744 3272 ntBASIC13.91□□□□□ -0.18
CAPNS1P04632 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CAPNS1P04632 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CAPNS1P04632 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CAPNS1P04632 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CAPNS1P04632 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CAPNS1P04632 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CAPNS1P04632 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CAPNS1P04632 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.9□□□□□ -0.18
CAPNS1P04632 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CAPNS1P04632 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CAPNS1P04632 HLA-DQB1-202ENST00000399079 1501 ntBASIC13.9□□□□□ -0.18
CAPNS1P04632 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CAPNS1P04632 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CAPNS1P04632 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.9□□□□□ -0.18
CAPNS1P04632 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CAPNS1P04632 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CAPNS1P04632 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CAPNS1P04632 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CAPNS1P04632 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CAPNS1P04632 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CAPNS1P04632 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.9□□□□□ -0.18
CAPNS1P04632 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC13.9□□□□□ -0.18
CAPNS1P04632 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CAPNS1P04632 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CAPNS1P04632 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC13.9□□□□□ -0.18
CAPNS1P04632 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC13.9□□□□□ -0.18
CAPNS1P04632 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
CAPNS1P04632 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CAPNS1P04632 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CAPNS1P04632 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CAPNS1P04632 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC13.9□□□□□ -0.18
CAPNS1P04632 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC13.9□□□□□ -0.18
CAPNS1P04632 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC13.9□□□□□ -0.18
CAPNS1P04632 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC13.9□□□□□ -0.18
CAPNS1P04632 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC13.9□□□□□ -0.18
CAPNS1P04632 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC13.9□□□□□ -0.18
CAPNS1P04632 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC13.9□□□□□ -0.18
CAPNS1P04632 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC13.9□□□□□ -0.18
CAPNS1P04632 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC13.9□□□□□ -0.18
CAPNS1P04632 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CAPNS1P04632 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CAPNS1P04632 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CAPNS1P04632 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
CAPNS1P04632 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
CAPNS1P04632 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.9□□□□□ -0.18
CAPNS1P04632 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.9□□□□□ -0.18
CAPNS1P04632 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CAPNS1P04632 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CAPNS1P04632 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CAPNS1P04632 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.9□□□□□ -0.18
CAPNS1P04632 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.9□□□□□ -0.18
CAPNS1P04632 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
CAPNS1P04632 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.9□□□□□ -0.18
CAPNS1P04632 RHPN1-AS1-201ENST00000518049 1918 ntBASIC13.9□□□□□ -0.18
CAPNS1P04632 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.9□□□□□ -0.18
CAPNS1P04632 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CAPNS1P04632 Z98257.2-202ENST00000641138 1548 ntBASIC13.9□□□□□ -0.19
CAPNS1P04632 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CAPNS1P04632 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CAPNS1P04632 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CAPNS1P04632 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CAPNS1P04632 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CAPNS1P04632 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC13.89□□□□□ -0.19
CAPNS1P04632 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.89□□□□□ -0.19
CAPNS1P04632 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.89□□□□□ -0.19
CAPNS1P04632 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
CAPNS1P04632 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CAPNS1P04632 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CAPNS1P04632 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.89□□□□□ -0.19
CAPNS1P04632 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CAPNS1P04632 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CAPNS1P04632 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CAPNS1P04632 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CAPNS1P04632 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CAPNS1P04632 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CAPNS1P04632 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
CAPNS1P04632 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC13.89□□□□□ -0.19
CAPNS1P04632 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.89□□□□□ -0.19
CAPNS1P04632 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.89□□□□□ -0.19
CAPNS1P04632 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC13.89□□□□□ -0.19
CAPNS1P04632 RN7SL494P-201ENST00000461517 304 ntBASIC13.89□□□□□ -0.19
CAPNS1P04632 AC106047.2-201ENST00000511723 743 ntBASIC13.89□□□□□ -0.19
CAPNS1P04632 GDNF-207ENST00000515058 764 ntTSL 5 BASIC13.89□□□□□ -0.19
CAPNS1P04632 RNA5SP417-201ENST00000516459 108 ntBASIC13.89□□□□□ -0.19
CAPNS1P04632 IGHEP1-201ENST00000521393 651 ntBASIC13.89□□□□□ -0.19
CAPNS1P04632 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.89□□□□□ -0.19
CAPNS1P04632 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CAPNS1P04632 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.89□□□□□ -0.19
CAPNS1P04632 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC13.89□□□□□ -0.19
CAPNS1P04632 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.89□□□□□ -0.19
CAPNS1P04632 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CAPNS1P04632 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC13.89□□□□□ -0.19
CAPNS1P04632 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC13.89□□□□□ -0.19
CAPNS1P04632 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CAPNS1P04632 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms