Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC12.73□□□□□ -0.37
P04436 AL009176.1-201ENST00000607876 650 ntBASIC12.73□□□□□ -0.37
P04436 AL161773.1-201ENST00000624845 863 ntBASIC12.73□□□□□ -0.37
P04436 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.73□□□□□ -0.37
P04436 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.73□□□□□ -0.37
P04436 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.73□□□□□ -0.37
P04436 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.73□□□□□ -0.37
P04436 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
P04436 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
P04436 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
P04436 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.73□□□□□ -0.37
P04436 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
P04436 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
P04436 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
P04436 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04436 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC12.72□□□□□ -0.37
P04436 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04436 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P04436 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04436 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04436 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04436 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04436 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P04436 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.72□□□□□ -0.37
P04436 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.72□□□□□ -0.37
P04436 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P04436 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04436 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.72□□□□□ -0.37
P04436 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04436 AC015909.5-201ENST00000624336 2266 ntBASIC12.72□□□□□ -0.37
P04436 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC12.72□□□□□ -0.37
P04436 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.72□□□□□ -0.37
P04436 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04436 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04436 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC12.72□□□□□ -0.37
P04436 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04436 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04436 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04436 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.72□□□□□ -0.37
P04436 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04436 SSR4-202ENST00000370085 526 ntTSL 2 BASIC12.72□□□□□ -0.37
P04436 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P04436 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC12.72□□□□□ -0.37
P04436 DKKL1P1-201ENST00000400550 698 ntBASIC12.72□□□□□ -0.37
P04436 PFN2-202ENST00000423691 911 ntTSL 2 BASIC12.72□□□□□ -0.37
P04436 LYPLA2P1-203ENST00000447689 696 ntBASIC12.72□□□□□ -0.37
P04436 LDHBP1-201ENST00000455730 1119 ntBASIC12.72□□□□□ -0.37
P04436 RN7SL23P-201ENST00000484055 275 ntBASIC12.72□□□□□ -0.37
P04436 CFL1-206ENST00000527344 962 ntTSL 2 BASIC12.72□□□□□ -0.37
P04436 BATF-202ENST00000555504 361 ntTSL 2 BASIC12.72□□□□□ -0.37
P04436 AC005041.3-201ENST00000606287 649 ntBASIC12.72□□□□□ -0.37
P04436 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC12.72□□□□□ -0.37
P04436 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04436 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.72□□□□□ -0.37
P04436 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.72□□□□□ -0.37
P04436 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
P04436 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04436 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04436 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04436 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04436 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04436 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
P04436 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04436 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.72□□□□□ -0.37
P04436 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.72□□□□□ -0.37
P04436 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.72□□□□□ -0.37
P04436 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
P04436 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04436 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
P04436 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
P04436 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.71□□□□□ -0.37
P04436 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.71□□□□□ -0.37
P04436 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
P04436 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
P04436 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
P04436 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
P04436 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
P04436 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04436 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.71□□□□□ -0.37
P04436 PES1P2-201ENST00000449745 1735 ntBASIC12.71□□□□□ -0.37
P04436 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC12.71□□□□□ -0.37
P04436 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC12.71□□□□□ -0.37
P04436 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04436 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
P04436 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
P04436 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC12.71□□□□□ -0.37
P04436 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms