Protein–RNA interactions for Protein: O00329

PIK3CD, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform, humanhuman

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3CDO00329 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PIK3CDO00329 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PIK3CDO00329 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PIK3CDO00329 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PIK3CDO00329 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PIK3CDO00329 SH3BGRL3-202ENST00000319041 768 ntTSL 2 BASIC15.61■□□□□ 0.09
PIK3CDO00329 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PIK3CDO00329 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC15.61■□□□□ 0.09
PIK3CDO00329 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC15.61■□□□□ 0.09
PIK3CDO00329 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC15.61■□□□□ 0.09
PIK3CDO00329 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC15.61■□□□□ 0.09
PIK3CDO00329 AL135901.1-201ENST00000451812 333 ntBASIC15.61■□□□□ 0.09
PIK3CDO00329 AC093909.3-201ENST00000504783 336 ntBASIC15.61■□□□□ 0.09
PIK3CDO00329 BAK1P2-201ENST00000532665 631 ntBASIC15.61■□□□□ 0.09
PIK3CDO00329 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC15.61■□□□□ 0.09
PIK3CDO00329 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PIK3CDO00329 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PIK3CDO00329 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PIK3CDO00329 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PIK3CDO00329 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PIK3CDO00329 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PIK3CDO00329 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PIK3CDO00329 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.61■□□□□ 0.09
PIK3CDO00329 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PIK3CDO00329 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PIK3CDO00329 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PIK3CDO00329 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
PIK3CDO00329 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PIK3CDO00329 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PIK3CDO00329 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PIK3CDO00329 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PIK3CDO00329 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PIK3CDO00329 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PIK3CDO00329 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PIK3CDO00329 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PIK3CDO00329 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PIK3CDO00329 AC104581.4-201ENST00000623126 3052 ntBASIC15.6■□□□□ 0.09
PIK3CDO00329 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC15.6■□□□□ 0.09
PIK3CDO00329 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PIK3CDO00329 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PIK3CDO00329 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PIK3CDO00329 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC15.6■□□□□ 0.09
PIK3CDO00329 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PIK3CDO00329 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PIK3CDO00329 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
PIK3CDO00329 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
PIK3CDO00329 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PIK3CDO00329 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC15.6■□□□□ 0.09
PIK3CDO00329 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC15.6■□□□□ 0.09
PIK3CDO00329 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC15.6■□□□□ 0.09
PIK3CDO00329 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC15.6■□□□□ 0.09
PIK3CDO00329 AL512288.1-201ENST00000448015 491 ntTSL 5 BASIC15.6■□□□□ 0.09
PIK3CDO00329 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PIK3CDO00329 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC15.6■□□□□ 0.09
PIK3CDO00329 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
PIK3CDO00329 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PIK3CDO00329 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC15.6■□□□□ 0.09
PIK3CDO00329 AC090136.2-201ENST00000517809 420 ntBASIC15.6■□□□□ 0.09
PIK3CDO00329 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PIK3CDO00329 NAA38-204ENST00000575208 529 ntTSL 3 BASIC15.6■□□□□ 0.09
PIK3CDO00329 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC15.6■□□□□ 0.09
PIK3CDO00329 AC008972.2-201ENST00000606587 494 ntBASIC15.6■□□□□ 0.09
PIK3CDO00329 CSTP2-201ENST00000610599 398 ntBASIC15.6■□□□□ 0.09
PIK3CDO00329 AC073869.4-201ENST00000620841 800 ntBASIC15.6■□□□□ 0.09
PIK3CDO00329 MIR6746-201ENST00000620971 63 ntBASIC15.6■□□□□ 0.09
PIK3CDO00329 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
PIK3CDO00329 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PIK3CDO00329 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PIK3CDO00329 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC15.6■□□□□ 0.09
PIK3CDO00329 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PIK3CDO00329 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PIK3CDO00329 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PIK3CDO00329 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
PIK3CDO00329 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PIK3CDO00329 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PIK3CDO00329 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PIK3CDO00329 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PIK3CDO00329 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PIK3CDO00329 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.59■□□□□ 0.09
PIK3CDO00329 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC15.59■□□□□ 0.09
PIK3CDO00329 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PIK3CDO00329 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PIK3CDO00329 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PIK3CDO00329 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC15.59■□□□□ 0.09
PIK3CDO00329 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PIK3CDO00329 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PIK3CDO00329 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PIK3CDO00329 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PIK3CDO00329 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PIK3CDO00329 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PIK3CDO00329 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PIK3CDO00329 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC15.59■□□□□ 0.09
PIK3CDO00329 AC097065.1-201ENST00000425737 517 ntBASIC15.59■□□□□ 0.09
PIK3CDO00329 AQP7P5-201ENST00000428759 1049 ntBASIC15.59■□□□□ 0.09
PIK3CDO00329 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PIK3CDO00329 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC15.59■□□□□ 0.09
PIK3CDO00329 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC15.59■□□□□ 0.09
PIK3CDO00329 AQP7P4-201ENST00000447083 1042 ntBASIC15.59■□□□□ 0.09
PIK3CDO00329 AQP7P2-201ENST00000453967 1041 ntBASIC15.59■□□□□ 0.09
PIK3CDO00329 MBP-227ENST00000526111 581 ntTSL 4 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms