Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC10.33□□□□□ -0.76
NACAE9PAV3 STK24-208ENST00000539966 9361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
NACAE9PAV3 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
NACAE9PAV3 RAB8B-201ENST00000321437 4943 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NACAE9PAV3 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NACAE9PAV3 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NACAE9PAV3 AL356585.2-201ENST00000625078 2396 ntBASIC10.33□□□□□ -0.76
NACAE9PAV3 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NACAE9PAV3 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NACAE9PAV3 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
NACAE9PAV3 CHD3-203ENST00000380358 7356 ntTSL 2 BASIC10.33□□□□□ -0.76
NACAE9PAV3 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC10.33□□□□□ -0.76
NACAE9PAV3 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC10.33□□□□□ -0.76
NACAE9PAV3 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NACAE9PAV3 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NACAE9PAV3 MTHFR-203ENST00000376585 8094 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
NACAE9PAV3 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NACAE9PAV3 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NACAE9PAV3 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NACAE9PAV3 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC10.33□□□□□ -0.76
NACAE9PAV3 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NACAE9PAV3 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
NACAE9PAV3 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
NACAE9PAV3 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NACAE9PAV3 POM121L10P-201ENST00000436994 1285 ntBASIC10.33□□□□□ -0.76
NACAE9PAV3 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NACAE9PAV3 CDC23-208ENST00000505120 455 ntTSL 3 BASIC10.33□□□□□ -0.76
NACAE9PAV3 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC10.33□□□□□ -0.76
NACAE9PAV3 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC10.33□□□□□ -0.76
NACAE9PAV3 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
NACAE9PAV3 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC10.33□□□□□ -0.76
NACAE9PAV3 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC10.33□□□□□ -0.76
NACAE9PAV3 AC005962.1-201ENST00000584100 773 ntBASIC10.33□□□□□ -0.76
NACAE9PAV3 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC10.33□□□□□ -0.76
NACAE9PAV3 AC104506.1-201ENST00000609247 429 ntBASIC10.33□□□□□ -0.76
NACAE9PAV3 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
NACAE9PAV3 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC10.33□□□□□ -0.76
NACAE9PAV3 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
NACAE9PAV3 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
NACAE9PAV3 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC10.33□□□□□ -0.76
NACAE9PAV3 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NACAE9PAV3 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
NACAE9PAV3 AL606760.3-201ENST00000569869 3591 ntBASIC10.33□□□□□ -0.76
NACAE9PAV3 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
NACAE9PAV3 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NACAE9PAV3 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC10.33□□□□□ -0.76
NACAE9PAV3 CSPG4P11-201ENST00000560634 4910 ntBASIC10.33□□□□□ -0.76
NACAE9PAV3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NACAE9PAV3 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
NACAE9PAV3 AC138028.6-201ENST00000616106 1482 ntBASIC10.33□□□□□ -0.76
NACAE9PAV3 MBLAC2-202ENST00000514906 1936 ntBASIC10.33□□□□□ -0.76
NACAE9PAV3 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NACAE9PAV3 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
NACAE9PAV3 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NACAE9PAV3 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NACAE9PAV3 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC10.32□□□□□ -0.76
NACAE9PAV3 PCDHGB1-201ENST00000523390 4590 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
NACAE9PAV3 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
NACAE9PAV3 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NACAE9PAV3 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
NACAE9PAV3 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC10.32□□□□□ -0.76
NACAE9PAV3 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NACAE9PAV3 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
NACAE9PAV3 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC10.32□□□□□ -0.76
NACAE9PAV3 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NACAE9PAV3 SNX21-203ENST00000372541 771 ntTSL 2 BASIC10.32□□□□□ -0.76
NACAE9PAV3 AK6-201ENST00000380818 1183 ntTSL 2 BASIC10.32□□□□□ -0.76
NACAE9PAV3 AL645933.1-201ENST00000440087 609 ntBASIC10.32□□□□□ -0.76
NACAE9PAV3 OR2R1P-201ENST00000441404 914 ntBASIC10.32□□□□□ -0.76
NACAE9PAV3 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC10.32□□□□□ -0.76
NACAE9PAV3 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
NACAE9PAV3 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NACAE9PAV3 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
NACAE9PAV3 NCK2-206ENST00000522586 490 ntTSL 5 BASIC10.32□□□□□ -0.76
NACAE9PAV3 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC10.32□□□□□ -0.76
NACAE9PAV3 RNF41-210ENST00000552244 716 ntTSL 3 BASIC10.32□□□□□ -0.76
NACAE9PAV3 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC10.32□□□□□ -0.76
NACAE9PAV3 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC10.32□□□□□ -0.76
NACAE9PAV3 AC009955.4-201ENST00000597192 544 ntBASIC10.32□□□□□ -0.76
NACAE9PAV3 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC10.32□□□□□ -0.76
NACAE9PAV3 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
NACAE9PAV3 AC027601.3-201ENST00000622907 509 ntBASIC10.32□□□□□ -0.76
NACAE9PAV3 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC10.32□□□□□ -0.76
NACAE9PAV3 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NACAE9PAV3 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NACAE9PAV3 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC10.32□□□□□ -0.76
NACAE9PAV3 AC073548.1-201ENST00000624088 1882 ntBASIC10.32□□□□□ -0.76
NACAE9PAV3 KCTD7-209ENST00000640385 4118 ntTSL 5 BASIC10.32□□□□□ -0.76
NACAE9PAV3 SNX29-205ENST00000566228 8171 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
NACAE9PAV3 USP39-220ENST00000613444 2161 ntTSL 2 BASIC10.32□□□□□ -0.76
NACAE9PAV3 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
NACAE9PAV3 AC009093.10-201ENST00000641956 1442 ntBASIC10.32□□□□□ -0.76
NACAE9PAV3 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NACAE9PAV3 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC10.32□□□□□ -0.76
NACAE9PAV3 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
NACAE9PAV3 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC10.32□□□□□ -0.76
NACAE9PAV3 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NACAE9PAV3 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
NACAE9PAV3 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
NACAE9PAV3 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms