Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
KCNIP3Q9Y2W7 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC11.76□□□□□ -0.53
KCNIP3Q9Y2W7 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP3Q9Y2W7 DNAJB3-202ENST00000449667 1266 ntBASIC11.76□□□□□ -0.53
KCNIP3Q9Y2W7 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP3Q9Y2W7 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP3Q9Y2W7 CLUHP6-201ENST00000580789 941 ntBASIC11.76□□□□□ -0.53
KCNIP3Q9Y2W7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC11.76□□□□□ -0.53
KCNIP3Q9Y2W7 SNORA50.1-201ENST00000628590 135 ntBASIC11.76□□□□□ -0.53
KCNIP3Q9Y2W7 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC11.76□□□□□ -0.53
KCNIP3Q9Y2W7 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP3Q9Y2W7 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC11.76□□□□□ -0.53
KCNIP3Q9Y2W7 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP3Q9Y2W7 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
KCNIP3Q9Y2W7 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP3Q9Y2W7 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP3Q9Y2W7 CIT-203ENST00000392521 8708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP3Q9Y2W7 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC11.76□□□□□ -0.53
KCNIP3Q9Y2W7 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP3Q9Y2W7 GOLGA2P5-201ENST00000266746 2395 ntBASIC11.76□□□□□ -0.53
KCNIP3Q9Y2W7 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP3Q9Y2W7 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC11.76□□□□□ -0.53
KCNIP3Q9Y2W7 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC11.76□□□□□ -0.53
KCNIP3Q9Y2W7 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC11.76□□□□□ -0.53
KCNIP3Q9Y2W7 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC11.76□□□□□ -0.53
KCNIP3Q9Y2W7 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC11.76□□□□□ -0.53
KCNIP3Q9Y2W7 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
KCNIP3Q9Y2W7 AL845472.1-202ENST00000624675 4080 ntBASIC11.76□□□□□ -0.53
KCNIP3Q9Y2W7 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 AC027369.3-201ENST00000530465 3707 ntBASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 SH3RF2-206ENST00000511217 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 AC055876.3-201ENST00000431496 288 ntBASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 AC138649.4-201ENST00000612222 287 ntBASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 RPSAP52-203ENST00000622976 1023 ntBASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 HERC2P9-206ENST00000529624 5187 ntBASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 AL645937.6-201ENST00000641122 3727 ntBASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 CARD14-209ENST00000573882 4537 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP3Q9Y2W7 SLC36A4-201ENST00000326402 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 ZNF473-205ENST00000595661 4828 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP3Q9Y2W7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms