Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 AC092053.3-201ENST00000641308 4975 ntBASIC12.52□□□□□ -0.41
COPS3Q9UNS2 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 AC008620.2-201ENST00000510294 1569 ntBASIC12.52□□□□□ -0.41
COPS3Q9UNS2 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
COPS3Q9UNS2 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 PCDHB19P-202ENST00000625133 2914 ntBASIC12.51□□□□□ -0.41
COPS3Q9UNS2 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 KRT17P7-201ENST00000451704 1104 ntBASIC12.51□□□□□ -0.41
COPS3Q9UNS2 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 AC102953.2-201ENST00000609755 3026 ntBASIC12.51□□□□□ -0.41
COPS3Q9UNS2 AC060814.4-201ENST00000594169 2163 ntBASIC12.51□□□□□ -0.41
COPS3Q9UNS2 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 AC018629.1-201ENST00000623381 1736 ntBASIC12.51□□□□□ -0.41
COPS3Q9UNS2 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
COPS3Q9UNS2 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
COPS3Q9UNS2 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms