Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 OAZ3-201ENST00000321531 851 ntTSL 5 BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 RHOC-205ENST00000369636 786 ntTSL 2 BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 METTL5-203ENST00000392640 800 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 RN7SL684P-201ENST00000465665 294 ntBASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 AF186996.6-201ENST00000485294 149 ntBASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 ALG10-202ENST00000538927 571 ntTSL 5 BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 KRT8P34-201ENST00000577607 1044 ntBASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 AC126755.5-201ENST00000622756 267 ntBASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 AC019109.1-201ENST00000401725 1874 ntBASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 AC091951.1-201ENST00000512854 2465 ntBASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CNTNAP3Q9BZ76 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 LINC00552-201ENST00000625151 2579 ntBASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 AC105250.1-201ENST00000509378 2057 ntBASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 POP5-201ENST00000341039 913 ntTSL 2 BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 MIR632-201ENST00000385193 94 ntBASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 AC000077.1-201ENST00000420012 953 ntBASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 AC007405.2-203ENST00000455988 547 ntTSL 4 BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 PARVG-208ENST00000466375 820 ntTSL 2 BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 PMM2-216ENST00000569958 698 ntTSL 2 BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 MIR663AHG-218ENST00000598448 804 ntTSL 5 BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 RN7SL827P-201ENST00000607480 288 ntBASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 AC007386.2-202ENST00000622718 1018 ntTSL 3 BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 GUCY2EP-203ENST00000531117 1918 ntBASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CNTNAP3Q9BZ76 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms