Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 TP53-221ENST00000615910 1149 ntTSL 5 BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 AC107918.4-201ENST00000641966 3141 ntBASIC16.32■□□□□ 0.2
SMARCC2Q8TAQ2 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 MIR557-201ENST00000385239 98 ntBASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 AC006987.1-201ENST00000413610 527 ntBASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 AC019193.1-201ENST00000506678 823 ntBASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 SIGLEC18P-201ENST00000602271 909 ntBASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SMARCC2Q8TAQ2 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 OS9-218ENST00000551035 2246 ntTSL 2 BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 AC125807.2-201ENST00000513358 3514 ntBASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 PARP3-201ENST00000398755 2336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SMARCC2Q8TAQ2 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms