Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.4□□□□□ -0.1
PCDH19Q8TAB3 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.11
PCDH19Q8TAB3 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 AC245140.2-201ENST00000624054 1939 ntBASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 AF013593.1-201ENST00000458074 1487 ntBASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 AC125807.2-201ENST00000513358 3514 ntBASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 AC091046.1-201ENST00000331871 207 ntBASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 AC006335.1-201ENST00000445200 547 ntBASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 AC095040.1-201ENST00000513286 675 ntBASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 PARP8-218ENST00000513738 596 ntTSL 4 BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 RN7SL190P-201ENST00000582519 257 ntBASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 KRT18P9-201ENST00000604826 1300 ntBASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDH19Q8TAB3 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 LINC00265-2P-201ENST00000413372 782 ntBASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 AC005722.1-201ENST00000431878 964 ntBASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 RN7SL258P-201ENST00000478664 300 ntBASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 MIR4754-201ENST00000582477 89 ntBASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 AF254983.2-201ENST00000612331 135 ntBASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 DGCR9-201ENST00000609630 2415 ntBASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDH19Q8TAB3 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms