Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 BANF1P3-201ENST00000412556 261 ntBASIC13.08□□□□□ -0.32
NUP43Q8NFH3 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 ISCA2P1-201ENST00000425548 448 ntBASIC13.08□□□□□ -0.32
NUP43Q8NFH3 FNTAP2-201ENST00000430308 634 ntBASIC13.08□□□□□ -0.32
NUP43Q8NFH3 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 KRT8P13-201ENST00000463294 1010 ntBASIC13.08□□□□□ -0.32
NUP43Q8NFH3 AC022494.1-201ENST00000466044 728 ntBASIC13.08□□□□□ -0.32
NUP43Q8NFH3 ARTN-209ENST00000479128 471 ntTSL 3 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 SCARNA20.5-201ENST00000516991 142 ntBASIC13.08□□□□□ -0.32
NUP43Q8NFH3 POU5F1P2-201ENST00000521750 823 ntBASIC13.08□□□□□ -0.32
NUP43Q8NFH3 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 MEG3_2.1-201ENST00000611456 105 ntBASIC13.08□□□□□ -0.32
NUP43Q8NFH3 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 AC138028.6-201ENST00000616106 1482 ntBASIC13.08□□□□□ -0.32
NUP43Q8NFH3 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NUP43Q8NFH3 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 ELK2AP-201ENST00000392510 1007 ntBASIC13.07□□□□□ -0.32
NUP43Q8NFH3 ACTG1P2-201ENST00000415776 1125 ntBASIC13.07□□□□□ -0.32
NUP43Q8NFH3 ACTG1P11-201ENST00000425411 1125 ntBASIC13.07□□□□□ -0.32
NUP43Q8NFH3 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 ZNF767P-206ENST00000513792 565 ntBASIC13.07□□□□□ -0.32
NUP43Q8NFH3 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 RN7SL774P-201ENST00000577467 290 ntBASIC13.07□□□□□ -0.32
NUP43Q8NFH3 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 AL133467.4-201ENST00000602953 725 ntBASIC13.07□□□□□ -0.32
NUP43Q8NFH3 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 LINC01783-202ENST00000614408 828 ntBASIC13.07□□□□□ -0.32
NUP43Q8NFH3 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 BX284668.2-205ENST00000619677 828 ntBASIC13.07□□□□□ -0.32
NUP43Q8NFH3 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NUP43Q8NFH3 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms