Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 SNX29P1-201ENST00000548357 1007 ntBASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 MAX-218ENST00000557746 571 ntTSL 4 BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
CCDC50Q8IVM0 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.83□□□□□ -0.03
CCDC50Q8IVM0 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CCDC50Q8IVM0 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.03
CCDC50Q8IVM0 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CCDC50Q8IVM0 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCDC50Q8IVM0 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CCDC50Q8IVM0 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCDC50Q8IVM0 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 MIR1909-201ENST00000411312 80 ntBASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 AC092580.1-201ENST00000433998 658 ntBASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 AC092299.1-201ENST00000632679 757 ntBASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC14.83□□□□□ -0.04
CCDC50Q8IVM0 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 FTO-214ENST00000636218 2227 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 POM121L14P-201ENST00000406100 1558 ntBASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 CSF2RBP1-201ENST00000447905 391 ntBASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.82□□□□□ -0.04
CCDC50Q8IVM0 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms