Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 RPL13AP5-201ENST00000439189 612 ntBASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 OR52X1P-201ENST00000446117 914 ntBASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 GOLGA2P10-201ENST00000550961 817 ntBASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 AC090825.2-201ENST00000557959 739 ntBASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 KRT18P8-201ENST00000581937 1246 ntBASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 AC068675.1-201ENST00000588996 561 ntTSL 4 BASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 AC063977.2-201ENST00000601996 421 ntBASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 PAX6-247ENST00000638965 979 ntTSL 5 BASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 AL596257.1-201ENST00000641463 2694 ntBASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 RBFOX1-214ENST00000552089 1430 ntTSL 5 BASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 INTS4P1-203ENST00000641008 3683 ntBASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 AF013593.1-201ENST00000458074 1487 ntBASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 USP8-219ENST00000625664 1568 ntTSL 5 BASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 AL928654.5-201ENST00000624831 2501 ntBASIC17.36■□□□□ 0.37
PTF1AQ7RTS3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 AC092384.3-202ENST00000564646 2873 ntBASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 AC024475.2-201ENST00000312173 879 ntBASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 IL6RP1-201ENST00000417848 1273 ntBASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 SVILP1-203ENST00000450581 486 ntTSL 3 BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 FPGT-205ENST00000482102 561 ntTSL 4 BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 RN7SL76P-201ENST00000482435 289 ntBASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 MIR4459-201ENST00000581837 66 ntBASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 PCP2-202ENST00000598935 457 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 GAPDH-205ENST00000396861 1348 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 ANP32B-201ENST00000339399 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 SETMAR-205ENST00000425863 1657 ntTSL 2 BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTF1AQ7RTS3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTF1AQ7RTS3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTF1AQ7RTS3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTF1AQ7RTS3 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTF1AQ7RTS3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.34■□□□□ 0.37
PTF1AQ7RTS3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTF1AQ7RTS3 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC17.34■□□□□ 0.37
PTF1AQ7RTS3 TFAM-201ENST00000373895 973 ntTSL 2 BASIC17.34■□□□□ 0.37
PTF1AQ7RTS3 PSMB8-201ENST00000374881 1351 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTF1AQ7RTS3 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
PTF1AQ7RTS3 AL161644.1-201ENST00000426901 1111 ntTSL 2 BASIC17.34■□□□□ 0.37
PTF1AQ7RTS3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTF1AQ7RTS3 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC17.34■□□□□ 0.37
PTF1AQ7RTS3 AC116347.1-201ENST00000442824 720 ntBASIC17.34■□□□□ 0.37
PTF1AQ7RTS3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PTF1AQ7RTS3 RN7SL111P-201ENST00000468841 285 ntBASIC17.34■□□□□ 0.37
PTF1AQ7RTS3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms