Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 TROVE2-206ENST00000400968 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 SHC1P1-201ENST00000425230 1745 ntBASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 ITFG1-204ENST00000544001 1849 ntTSL 2 BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 AC103592.1-201ENST00000394513 664 ntBASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 AL512384.1-201ENST00000406683 331 ntBASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 CD8B2-202ENST00000417670 633 ntBASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 GAPDHP21-201ENST00000450301 1010 ntBASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 AC007389.4-201ENST00000454674 793 ntBASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 RBM7-207ENST00000544582 692 ntTSL 3 BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 AC009486.1-201ENST00000569860 813 ntBASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 AC015936.2-201ENST00000593177 259 ntBASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 AC008825.2-201ENST00000603374 718 ntBASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 CU634019.7-201ENST00000624153 1185 ntBASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 FP236241.2-201ENST00000624906 1185 ntBASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 PFAS-212ENST00000625942 396 ntTSL 5 BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 SARS-202ENST00000369923 1882 ntTSL 5 BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 FAS-202ENST00000352159 1722 ntTSL 5 BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
ANKRD55Q3KP44 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 AC092117.1-201ENST00000621230 3250 ntBASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 TPM3P8-201ENST00000330554 643 ntBASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 AP005018.1-201ENST00000525475 301 ntBASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 POLE2-203ENST00000553805 496 ntTSL 2 BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 OR10B1P-201ENST00000601666 907 ntBASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 AC239800.4-201ENST00000603712 296 ntBASIC11.62□□□□□ -0.55
ANKRD55Q3KP44 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms