Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
AP1S1P61966 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
AP1S1P61966 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S1P61966 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S1P61966 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S1P61966 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S1P61966 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC14□□□□□ -0.17
AP1S1P61966 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S1P61966 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S1P61966 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S1P61966 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
AP1S1P61966 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S1P61966 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S1P61966 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S1P61966 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S1P61966 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC14□□□□□ -0.17
AP1S1P61966 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S1P61966 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14□□□□□ -0.17
AP1S1P61966 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
AP1S1P61966 RCC2P5-201ENST00000492126 1487 ntBASIC13.99□□□□□ -0.17
AP1S1P61966 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.99□□□□□ -0.17
AP1S1P61966 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S1P61966 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.99□□□□□ -0.17
AP1S1P61966 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S1P61966 AC089987.1-201ENST00000551654 2209 ntBASIC13.99□□□□□ -0.17
AP1S1P61966 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S1P61966 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S1P61966 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S1P61966 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S1P61966 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
AP1S1P61966 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.99□□□□□ -0.17
AP1S1P61966 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S1P61966 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S1P61966 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S1P61966 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S1P61966 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
AP1S1P61966 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S1P61966 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S1P61966 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S1P61966 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S1P61966 Z69890.1-201ENST00000382990 339 ntBASIC13.99□□□□□ -0.17
AP1S1P61966 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S1P61966 HIST2H2BA-201ENST00000412169 381 ntBASIC13.99□□□□□ -0.17
AP1S1P61966 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC13.99□□□□□ -0.17
AP1S1P61966 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC13.99□□□□□ -0.17
AP1S1P61966 AC098935.1-201ENST00000446057 611 ntBASIC13.99□□□□□ -0.17
AP1S1P61966 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S1P61966 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC13.99□□□□□ -0.17
AP1S1P61966 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC13.99□□□□□ -0.17
AP1S1P61966 AC093300.1-201ENST00000510368 1201 ntBASIC13.99□□□□□ -0.17
AP1S1P61966 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC13.99□□□□□ -0.17
AP1S1P61966 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC13.99□□□□□ -0.17
AP1S1P61966 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.99□□□□□ -0.17
AP1S1P61966 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC13.99□□□□□ -0.17
AP1S1P61966 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC13.99□□□□□ -0.17
AP1S1P61966 AC007952.4-201ENST00000573866 637 ntBASIC13.99□□□□□ -0.17
AP1S1P61966 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC13.99□□□□□ -0.17
AP1S1P61966 MIR3180-2-201ENST00000581748 88 ntBASIC13.99□□□□□ -0.17
AP1S1P61966 WDR7-208ENST00000589935 544 ntTSL 4 BASIC13.99□□□□□ -0.17
AP1S1P61966 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
AP1S1P61966 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC13.99□□□□□ -0.17
AP1S1P61966 AC073352.2-201ENST00000609385 439 ntBASIC13.99□□□□□ -0.17
AP1S1P61966 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S1P61966 AC005618.3-201ENST00000624928 458 ntBASIC13.99□□□□□ -0.17
AP1S1P61966 LINC00244-201ENST00000625073 613 ntBASIC13.99□□□□□ -0.17
AP1S1P61966 AC010327.5-201ENST00000586923 3061 ntBASIC13.99□□□□□ -0.17
AP1S1P61966 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S1P61966 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
AP1S1P61966 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
AP1S1P61966 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.99□□□□□ -0.17
AP1S1P61966 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S1P61966 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S1P61966 CR383656.2-201ENST00000548656 2254 ntBASIC13.99□□□□□ -0.17
AP1S1P61966 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
AP1S1P61966 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S1P61966 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S1P61966 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC13.99□□□□□ -0.17
AP1S1P61966 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S1P61966 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
AP1S1P61966 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC13.99□□□□□ -0.17
AP1S1P61966 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S1P61966 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S1P61966 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S1P61966 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.98□□□□□ -0.17
AP1S1P61966 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.98□□□□□ -0.17
AP1S1P61966 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S1P61966 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
AP1S1P61966 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S1P61966 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.98□□□□□ -0.17
AP1S1P61966 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S1P61966 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
AP1S1P61966 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S1P61966 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S1P61966 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S1P61966 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S1P61966 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S1P61966 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.98□□□□□ -0.17
AP1S1P61966 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S1P61966 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
AP1S1P61966 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms