Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 AC134698.3-201ENST00000523880 214 ntBASIC12.86□□□□□ -0.35
CLDN20P56880 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC12.86□□□□□ -0.35
CLDN20P56880 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.86□□□□□ -0.35
CLDN20P56880 PHBP15-201ENST00000574228 665 ntBASIC12.86□□□□□ -0.35
CLDN20P56880 AC079336.7-201ENST00000623428 1078 ntBASIC12.86□□□□□ -0.35
CLDN20P56880 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC12.86□□□□□ -0.35
CLDN20P56880 NCLP1-201ENST00000445357 1963 ntBASIC12.86□□□□□ -0.35
CLDN20P56880 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.86□□□□□ -0.35
CLDN20P56880 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
CLDN20P56880 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CLDN20P56880 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CLDN20P56880 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CLDN20P56880 LINC00115-201ENST00000473798 1317 ntBASIC12.86□□□□□ -0.35
CLDN20P56880 TUBB8P4-201ENST00000511806 1324 ntBASIC12.86□□□□□ -0.35
CLDN20P56880 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.86□□□□□ -0.35
CLDN20P56880 POM121L14P-201ENST00000406100 1558 ntBASIC12.86□□□□□ -0.35
CLDN20P56880 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CLDN20P56880 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CLDN20P56880 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.85□□□□□ -0.35
CLDN20P56880 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.85□□□□□ -0.35
CLDN20P56880 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.85□□□□□ -0.35
CLDN20P56880 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CLDN20P56880 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC12.85□□□□□ -0.35
CLDN20P56880 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
CLDN20P56880 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
CLDN20P56880 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 OR2K2-202ENST00000374428 1038 ntBASIC12.85□□□□□ -0.35
CLDN20P56880 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 BANF1P3-201ENST00000412556 261 ntBASIC12.85□□□□□ -0.35
CLDN20P56880 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.85□□□□□ -0.35
CLDN20P56880 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC12.85□□□□□ -0.35
CLDN20P56880 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC12.85□□□□□ -0.35
CLDN20P56880 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.85□□□□□ -0.35
CLDN20P56880 RN7SL769P-201ENST00000469386 295 ntBASIC12.85□□□□□ -0.35
CLDN20P56880 RN7SL258P-201ENST00000478664 300 ntBASIC12.85□□□□□ -0.35
CLDN20P56880 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CLDN20P56880 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.85□□□□□ -0.35
CLDN20P56880 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC12.85□□□□□ -0.35
CLDN20P56880 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.85□□□□□ -0.35
CLDN20P56880 AC026803.1-201ENST00000569130 274 ntBASIC12.85□□□□□ -0.35
CLDN20P56880 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CLDN20P56880 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC12.85□□□□□ -0.35
CLDN20P56880 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC12.85□□□□□ -0.35
CLDN20P56880 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.85□□□□□ -0.35
CLDN20P56880 CICP1-201ENST00000416803 2410 ntBASIC12.85□□□□□ -0.35
CLDN20P56880 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CLDN20P56880 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.85□□□□□ -0.35
CLDN20P56880 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.85□□□□□ -0.35
CLDN20P56880 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.85□□□□□ -0.35
CLDN20P56880 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.85□□□□□ -0.35
CLDN20P56880 TBC1D3J-201ENST00000620719 1426 ntBASIC12.85□□□□□ -0.35
CLDN20P56880 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
CLDN20P56880 VENTXP1-201ENST00000569334 2716 ntBASIC12.85□□□□□ -0.35
CLDN20P56880 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.85□□□□□ -0.35
CLDN20P56880 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.85□□□□□ -0.35
CLDN20P56880 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CLDN20P56880 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CLDN20P56880 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.84□□□□□ -0.35
CLDN20P56880 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN20P56880 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN20P56880 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.84□□□□□ -0.35
CLDN20P56880 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN20P56880 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN20P56880 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN20P56880 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CLDN20P56880 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms