Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 MIR4326-201ENST00000582203 59 ntBASIC15.31■□□□□ 0.04
CDK7P50613 NEK4P3-201ENST00000604859 544 ntBASIC15.31■□□□□ 0.04
CDK7P50613 AL591424.3-201ENST00000614278 872 ntBASIC15.31■□□□□ 0.04
CDK7P50613 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDK7P50613 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.31■□□□□ 0.04
CDK7P50613 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC15.31■□□□□ 0.04
CDK7P50613 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDK7P50613 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDK7P50613 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDK7P50613 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDK7P50613 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDK7P50613 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDK7P50613 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDK7P50613 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDK7P50613 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDK7P50613 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDK7P50613 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDK7P50613 AC090505.1-201ENST00000430515 1834 ntBASIC15.31■□□□□ 0.04
CDK7P50613 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDK7P50613 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDK7P50613 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CDK7P50613 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CDK7P50613 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.31■□□□□ 0.04
CDK7P50613 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDK7P50613 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
CDK7P50613 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK7P50613 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDK7P50613 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.3■□□□□ 0.04
CDK7P50613 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK7P50613 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CDK7P50613 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDK7P50613 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CDK7P50613 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.3■□□□□ 0.04
CDK7P50613 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDK7P50613 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK7P50613 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDK7P50613 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK7P50613 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK7P50613 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.3■□□□□ 0.04
CDK7P50613 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CDK7P50613 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK7P50613 GGTLC4P-201ENST00000402176 664 ntBASIC15.3■□□□□ 0.04
CDK7P50613 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK7P50613 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.3■□□□□ 0.04
CDK7P50613 BEND3P1-201ENST00000421591 1944 ntBASIC15.3■□□□□ 0.04
CDK7P50613 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC15.3■□□□□ 0.04
CDK7P50613 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC15.3■□□□□ 0.04
CDK7P50613 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK7P50613 TPT1P11-201ENST00000458482 498 ntBASIC15.3■□□□□ 0.04
CDK7P50613 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK7P50613 HNRNPA3P6-201ENST00000472163 1006 ntBASIC15.3■□□□□ 0.04
CDK7P50613 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC15.3■□□□□ 0.04
CDK7P50613 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CDK7P50613 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC15.3■□□□□ 0.04
CDK7P50613 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC15.3■□□□□ 0.04
CDK7P50613 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC15.3■□□□□ 0.04
CDK7P50613 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK7P50613 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDK7P50613 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC15.3■□□□□ 0.04
CDK7P50613 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDK7P50613 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC15.3■□□□□ 0.04
CDK7P50613 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK7P50613 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDK7P50613 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC15.3■□□□□ 0.04
CDK7P50613 AC048382.6-201ENST00000621980 1223 ntBASIC15.3■□□□□ 0.04
CDK7P50613 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CDK7P50613 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDK7P50613 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK7P50613 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK7P50613 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK7P50613 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDK7P50613 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK7P50613 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK7P50613 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK7P50613 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK7P50613 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
CDK7P50613 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDK7P50613 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDK7P50613 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDK7P50613 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDK7P50613 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CDK7P50613 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.29■□□□□ 0.04
CDK7P50613 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDK7P50613 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDK7P50613 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC15.29■□□□□ 0.04
CDK7P50613 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDK7P50613 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDK7P50613 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDK7P50613 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDK7P50613 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC15.29■□□□□ 0.04
CDK7P50613 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDK7P50613 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDK7P50613 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDK7P50613 GH1-203ENST00000351388 685 ntTSL 2 BASIC15.29■□□□□ 0.04
CDK7P50613 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CDK7P50613 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC15.29■□□□□ 0.04
CDK7P50613 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC15.29■□□□□ 0.04
CDK7P50613 AL136084.1-201ENST00000449172 318 ntBASIC15.29■□□□□ 0.04
CDK7P50613 BMF-206ENST00000558774 671 ntTSL 3 BASIC15.29■□□□□ 0.04
CDK7P50613 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms