Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEDD4P46934 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEDD4P46934 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NEDD4P46934 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NEDD4P46934 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEDD4P46934 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
NEDD4P46934 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NEDD4P46934 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NEDD4P46934 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEDD4P46934 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NEDD4P46934 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NEDD4P46934 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
NEDD4P46934 OR2W2P-201ENST00000406313 909 ntBASIC16.32■□□□□ 0.2
NEDD4P46934 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NEDD4P46934 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
NEDD4P46934 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.32■□□□□ 0.2
NEDD4P46934 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NEDD4P46934 EEF1GP8-201ENST00000506566 1154 ntBASIC16.32■□□□□ 0.2
NEDD4P46934 HELLS-212ENST00000630929 400 ntTSL 5 BASIC16.32■□□□□ 0.2
NEDD4P46934 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC16.32■□□□□ 0.2
NEDD4P46934 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC16.32■□□□□ 0.2
NEDD4P46934 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEDD4P46934 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NEDD4P46934 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEDD4P46934 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC16.32■□□□□ 0.2
NEDD4P46934 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEDD4P46934 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
NEDD4P46934 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
NEDD4P46934 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NEDD4P46934 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC16.32■□□□□ 0.2
NEDD4P46934 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NEDD4P46934 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEDD4P46934 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NEDD4P46934 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NEDD4P46934 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NEDD4P46934 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC16.31■□□□□ 0.2
NEDD4P46934 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC16.31■□□□□ 0.2
NEDD4P46934 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEDD4P46934 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC16.31■□□□□ 0.2
NEDD4P46934 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEDD4P46934 CICP20-201ENST00000443330 2801 ntBASIC16.31■□□□□ 0.2
NEDD4P46934 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NEDD4P46934 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEDD4P46934 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEDD4P46934 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEDD4P46934 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.31■□□□□ 0.2
NEDD4P46934 RPSAP31-201ENST00000416648 895 ntBASIC16.31■□□□□ 0.2
NEDD4P46934 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.31■□□□□ 0.2
NEDD4P46934 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEDD4P46934 RN7SL555P-201ENST00000584742 339 ntBASIC16.31■□□□□ 0.2
NEDD4P46934 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC16.31■□□□□ 0.2
NEDD4P46934 AC140113.1-201ENST00000603467 169 ntBASIC16.31■□□□□ 0.2
NEDD4P46934 COX6A1P2-201ENST00000620597 330 ntBASIC16.31■□□□□ 0.2
NEDD4P46934 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NEDD4P46934 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC16.31■□□□□ 0.2
NEDD4P46934 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NEDD4P46934 COL6A4P2-202ENST00000504443 2753 ntBASIC16.31■□□□□ 0.2
NEDD4P46934 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
NEDD4P46934 F2-205ENST00000530231 1849 ntTSL 5 BASIC16.31■□□□□ 0.2
NEDD4P46934 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC16.31■□□□□ 0.2
NEDD4P46934 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NEDD4P46934 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
NEDD4P46934 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEDD4P46934 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEDD4P46934 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEDD4P46934 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NEDD4P46934 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEDD4P46934 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC16.31■□□□□ 0.2
NEDD4P46934 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NEDD4P46934 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.31■□□□□ 0.2
NEDD4P46934 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC16.31■□□□□ 0.2
NEDD4P46934 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC16.3■□□□□ 0.2
NEDD4P46934 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEDD4P46934 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NEDD4P46934 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEDD4P46934 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC16.3■□□□□ 0.2
NEDD4P46934 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC16.3■□□□□ 0.2
NEDD4P46934 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEDD4P46934 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NEDD4P46934 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NEDD4P46934 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NEDD4P46934 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC16.3■□□□□ 0.2
NEDD4P46934 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC16.3■□□□□ 0.2
NEDD4P46934 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEDD4P46934 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEDD4P46934 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEDD4P46934 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NEDD4P46934 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEDD4P46934 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEDD4P46934 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEDD4P46934 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEDD4P46934 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEDD4P46934 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.3■□□□□ 0.2
NEDD4P46934 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
NEDD4P46934 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC16.3■□□□□ 0.2
NEDD4P46934 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NEDD4P46934 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
NEDD4P46934 DKKL1P1-201ENST00000400550 698 ntBASIC16.3■□□□□ 0.2
NEDD4P46934 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC16.3■□□□□ 0.2
NEDD4P46934 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms