Protein–RNA interactions for Protein: P46100

ATRX, Transcriptional regulator ATRX, humanhuman

Predictions only

Length 2,492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRXP46100 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC12.57□□□□□ -0.4
ATRXP46100 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATRXP46100 AL031058.1-201ENST00000561592 888 ntBASIC12.57□□□□□ -0.4
ATRXP46100 RN7SL624P-201ENST00000580297 278 ntBASIC12.57□□□□□ -0.4
ATRXP46100 AL031673.1-201ENST00000611460 466 ntBASIC12.57□□□□□ -0.4
ATRXP46100 FAM236C-201ENST00000636267 463 ntAPPRIS P5 TSL 5 BASIC12.57□□□□□ -0.4
ATRXP46100 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ATRXP46100 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.57□□□□□ -0.4
ATRXP46100 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATRXP46100 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
ATRXP46100 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ATRXP46100 AC099398.1-201ENST00000567919 2776 ntBASIC12.57□□□□□ -0.4
ATRXP46100 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATRXP46100 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATRXP46100 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.57□□□□□ -0.4
ATRXP46100 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.57□□□□□ -0.4
ATRXP46100 USP35-204ENST00000530267 2419 ntTSL 2 BASIC12.57□□□□□ -0.4
ATRXP46100 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
ATRXP46100 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.57□□□□□ -0.4
ATRXP46100 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATRXP46100 RTP2-201ENST00000358241 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATRXP46100 AC026271.1-201ENST00000447794 1348 ntBASIC12.57□□□□□ -0.4
ATRXP46100 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATRXP46100 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
ATRXP46100 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
ATRXP46100 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATRXP46100 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
ATRXP46100 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ATRXP46100 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC12.57□□□□□ -0.4
ATRXP46100 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATRXP46100 ZNF451-205ENST00000370710 375 ntTSL 2 BASIC12.56□□□□□ -0.4
ATRXP46100 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATRXP46100 GGT8P-201ENST00000418938 532 ntBASIC12.56□□□□□ -0.4
ATRXP46100 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC12.56□□□□□ -0.4
ATRXP46100 PTS-204ENST00000525803 625 ntTSL 3 BASIC12.56□□□□□ -0.4
ATRXP46100 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC12.56□□□□□ -0.4
ATRXP46100 IGHV3OR16-11-201ENST00000565524 349 ntBASIC12.56□□□□□ -0.4
ATRXP46100 RPSAP67-201ENST00000584105 862 ntBASIC12.56□□□□□ -0.4
ATRXP46100 AC015688.5-201ENST00000584605 603 ntAPPRIS P5 TSL 2 BASIC12.56□□□□□ -0.4
ATRXP46100 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATRXP46100 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ATRXP46100 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATRXP46100 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
ATRXP46100 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATRXP46100 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC12.56□□□□□ -0.4
ATRXP46100 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.56□□□□□ -0.4
ATRXP46100 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.56□□□□□ -0.4
ATRXP46100 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATRXP46100 PES1P2-201ENST00000449745 1735 ntBASIC12.56□□□□□ -0.4
ATRXP46100 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATRXP46100 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
ATRXP46100 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC12.56□□□□□ -0.4
ATRXP46100 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATRXP46100 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATRXP46100 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
ATRXP46100 SULT1A3-201ENST00000338971 1097 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATRXP46100 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC12.56□□□□□ -0.4
ATRXP46100 OR7E155P-201ENST00000412208 1014 ntBASIC12.56□□□□□ -0.4
ATRXP46100 CLK2P1-201ENST00000416636 1294 ntBASIC12.56□□□□□ -0.4
ATRXP46100 PPP3CB-AS1-201ENST00000422977 930 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ATRXP46100 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC12.56□□□□□ -0.4
ATRXP46100 AC010542.3-202ENST00000561728 701 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
ATRXP46100 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC12.56□□□□□ -0.4
ATRXP46100 TTC38-207ENST00000629918 162 ntTSL 5 BASIC12.56□□□□□ -0.4
ATRXP46100 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATRXP46100 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATRXP46100 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ATRXP46100 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
ATRXP46100 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC12.56□□□□□ -0.4
ATRXP46100 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ATRXP46100 AC007326.2-201ENST00000624224 7579 ntBASIC12.56□□□□□ -0.4
ATRXP46100 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATRXP46100 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ATRXP46100 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC12.56□□□□□ -0.4
ATRXP46100 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
ATRXP46100 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC12.56□□□□□ -0.4
ATRXP46100 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATRXP46100 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATRXP46100 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
ATRXP46100 NTF3-201ENST00000331010 1028 ntAPPRIS P3 BASIC12.55□□□□□ -0.4
ATRXP46100 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC12.55□□□□□ -0.4
ATRXP46100 HDAC2-AS2-216ENST00000522844 808 ntTSL 5 BASIC12.55□□□□□ -0.4
ATRXP46100 SRPK2P-201ENST00000523408 1100 ntBASIC12.55□□□□□ -0.4
ATRXP46100 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC12.55□□□□□ -0.4
ATRXP46100 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC12.55□□□□□ -0.4
ATRXP46100 AC005154.1-202ENST00000578293 999 ntTSL 5 BASIC12.55□□□□□ -0.4
ATRXP46100 AC011306.1-201ENST00000606639 1275 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 GARS-210ENST00000627489 324 ntTSL 4 BASIC12.55□□□□□ -0.4
ATRXP46100 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 AC215219.1-201ENST00000400706 1817 ntBASIC12.55□□□□□ -0.4
ATRXP46100 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.55□□□□□ -0.4
ATRXP46100 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATRXP46100 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
ATRXP46100 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms