Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
COL15A1P39059 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
COL15A1P39059 CDK4P1-201ENST00000454213 828 ntBASIC17.33■□□□□ 0.36
COL15A1P39059 ALG1L15P-201ENST00000482834 794 ntBASIC17.33■□□□□ 0.36
COL15A1P39059 AC093700.1-201ENST00000503348 717 ntBASIC17.33■□□□□ 0.36
COL15A1P39059 NDUFB2P1-201ENST00000506966 295 ntBASIC17.33■□□□□ 0.36
COL15A1P39059 GPX3-202ENST00000517973 612 ntTSL 3 BASIC17.33■□□□□ 0.36
COL15A1P39059 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
COL15A1P39059 MIR5091-201ENST00000578707 93 ntBASIC17.33■□□□□ 0.36
COL15A1P39059 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC17.33■□□□□ 0.36
COL15A1P39059 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC17.33■□□□□ 0.36
COL15A1P39059 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COL15A1P39059 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COL15A1P39059 RCC2P5-201ENST00000492126 1487 ntBASIC17.33■□□□□ 0.36
COL15A1P39059 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COL15A1P39059 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
COL15A1P39059 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COL15A1P39059 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC17.33■□□□□ 0.36
COL15A1P39059 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COL15A1P39059 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COL15A1P39059 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COL15A1P39059 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COL15A1P39059 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
COL15A1P39059 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL15A1P39059 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
COL15A1P39059 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL15A1P39059 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL15A1P39059 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
COL15A1P39059 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL15A1P39059 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL15A1P39059 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC17.32■□□□□ 0.36
COL15A1P39059 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL15A1P39059 AGAP10P-201ENST00000454844 2418 ntBASIC17.32■□□□□ 0.36
COL15A1P39059 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
COL15A1P39059 U73169.1-201ENST00000395152 367 ntBASIC17.32■□□□□ 0.36
COL15A1P39059 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC17.32■□□□□ 0.36
COL15A1P39059 RN7SL523P-201ENST00000484401 298 ntBASIC17.32■□□□□ 0.36
COL15A1P39059 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC17.32■□□□□ 0.36
COL15A1P39059 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC17.32■□□□□ 0.36
COL15A1P39059 AAMDC-207ENST00000527134 693 ntTSL 3 BASIC17.32■□□□□ 0.36
COL15A1P39059 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC17.32■□□□□ 0.36
COL15A1P39059 PHBP18-201ENST00000546648 813 ntBASIC17.32■□□□□ 0.36
COL15A1P39059 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC17.32■□□□□ 0.36
COL15A1P39059 GRAMD4P6-201ENST00000556999 244 ntBASIC17.32■□□□□ 0.36
COL15A1P39059 DUT-207ENST00000559416 635 ntTSL 2 BASIC17.32■□□□□ 0.36
COL15A1P39059 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC17.32■□□□□ 0.36
COL15A1P39059 AL356740.1-201ENST00000602192 1297 ntBASIC17.32■□□□□ 0.36
COL15A1P39059 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC17.32■□□□□ 0.36
COL15A1P39059 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
COL15A1P39059 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL15A1P39059 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL15A1P39059 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL15A1P39059 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL15A1P39059 MARK2P9-201ENST00000430958 1727 ntBASIC17.32■□□□□ 0.36
COL15A1P39059 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC17.32■□□□□ 0.36
COL15A1P39059 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC17.32■□□□□ 0.36
COL15A1P39059 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
COL15A1P39059 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL15A1P39059 AC023794.5-201ENST00000564380 2157 ntBASIC17.32■□□□□ 0.36
COL15A1P39059 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL15A1P39059 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
COL15A1P39059 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL15A1P39059 PTN-202ENST00000393083 1599 ntTSL 5 BASIC17.32■□□□□ 0.36
COL15A1P39059 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
COL15A1P39059 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL15A1P39059 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL15A1P39059 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL15A1P39059 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL15A1P39059 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL15A1P39059 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
COL15A1P39059 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL15A1P39059 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
COL15A1P39059 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
COL15A1P39059 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
COL15A1P39059 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC17.31■□□□□ 0.36
COL15A1P39059 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL15A1P39059 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL15A1P39059 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COL15A1P39059 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL15A1P39059 AC245140.2-201ENST00000624054 1939 ntBASIC17.31■□□□□ 0.36
COL15A1P39059 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL15A1P39059 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL15A1P39059 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC17.31■□□□□ 0.36
COL15A1P39059 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
COL15A1P39059 RPSAP6-201ENST00000417882 882 ntBASIC17.31■□□□□ 0.36
COL15A1P39059 AP000533.1-201ENST00000456143 1177 ntBASIC17.31■□□□□ 0.36
COL15A1P39059 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC17.31■□□□□ 0.36
COL15A1P39059 AC099328.1-201ENST00000498809 1030 ntBASIC17.31■□□□□ 0.36
COL15A1P39059 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC17.31■□□□□ 0.36
COL15A1P39059 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC17.31■□□□□ 0.36
COL15A1P39059 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC17.31■□□□□ 0.36
COL15A1P39059 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC17.31■□□□□ 0.36
COL15A1P39059 PACRG-AS3-203ENST00000614038 1246 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COL15A1P39059 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC17.31■□□□□ 0.36
COL15A1P39059 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
COL15A1P39059 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
COL15A1P39059 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL15A1P39059 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC17.31■□□□□ 0.36
COL15A1P39059 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC17.31■□□□□ 0.36
COL15A1P39059 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms