Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CDH3P22223 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH3P22223 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.8□□□□□ -0.2
CDH3P22223 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH3P22223 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH3P22223 CAP2P1-201ENST00000557743 1390 ntBASIC13.8□□□□□ -0.2
CDH3P22223 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.8□□□□□ -0.2
CDH3P22223 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
CDH3P22223 AC015802.1-201ENST00000588104 1449 ntBASIC13.8□□□□□ -0.2
CDH3P22223 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH3P22223 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH3P22223 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH3P22223 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH3P22223 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.8□□□□□ -0.2
CDH3P22223 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.8□□□□□ -0.2
CDH3P22223 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH3P22223 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH3P22223 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.79□□□□□ -0.2
CDH3P22223 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH3P22223 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
CDH3P22223 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CDH3P22223 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDH3P22223 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH3P22223 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CDH3P22223 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDH3P22223 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDH3P22223 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.79□□□□□ -0.2
CDH3P22223 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.79□□□□□ -0.2
CDH3P22223 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH3P22223 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CDH3P22223 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH3P22223 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH3P22223 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.79□□□□□ -0.2
CDH3P22223 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH3P22223 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CDH3P22223 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CDH3P22223 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDH3P22223 KRT17P5-201ENST00000332088 839 ntBASIC13.79□□□□□ -0.2
CDH3P22223 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CDH3P22223 AL583805.1-201ENST00000391389 531 ntBASIC13.79□□□□□ -0.2
CDH3P22223 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDH3P22223 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDH3P22223 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC13.79□□□□□ -0.2
CDH3P22223 RPSAP15-201ENST00000448168 861 ntBASIC13.79□□□□□ -0.2
CDH3P22223 AP000358.1-201ENST00000456260 156 ntBASIC13.79□□□□□ -0.2
CDH3P22223 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDH3P22223 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH3P22223 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDH3P22223 FOS-206ENST00000555347 1280 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH3P22223 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH3P22223 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.79□□□□□ -0.2
CDH3P22223 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC13.79□□□□□ -0.2
CDH3P22223 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC13.79□□□□□ -0.2
CDH3P22223 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC13.79□□□□□ -0.2
CDH3P22223 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.79□□□□□ -0.2
CDH3P22223 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH3P22223 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CDH3P22223 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH3P22223 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CDH3P22223 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.79□□□□□ -0.2
CDH3P22223 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH3P22223 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH3P22223 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH3P22223 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CDH3P22223 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
CDH3P22223 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
CDH3P22223 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH3P22223 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CDH3P22223 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CDH3P22223 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CDH3P22223 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CDH3P22223 AP001972.5-201ENST00000624624 2338 ntBASIC13.79□□□□□ -0.2
CDH3P22223 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
CDH3P22223 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH3P22223 CCT8L1P-201ENST00000465400 1674 ntBASIC13.79□□□□□ -0.2
CDH3P22223 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH3P22223 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.78□□□□□ -0.2
CDH3P22223 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDH3P22223 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CDH3P22223 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH3P22223 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CDH3P22223 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.78□□□□□ -0.2
CDH3P22223 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDH3P22223 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CDH3P22223 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.78□□□□□ -0.2
CDH3P22223 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.78□□□□□ -0.2
CDH3P22223 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.78□□□□□ -0.2
CDH3P22223 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CDH3P22223 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CDH3P22223 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH3P22223 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CDH3P22223 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CDH3P22223 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CDH3P22223 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CDH3P22223 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH3P22223 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CDH3P22223 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH3P22223 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CDH3P22223 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.78□□□□□ -0.2
CDH3P22223 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms