Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC10.95□□□□□ -0.66
CD28P10747 KRT18P66-201ENST00000452970 1269 ntBASIC10.95□□□□□ -0.66
CD28P10747 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC10.95□□□□□ -0.66
CD28P10747 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 RN7SL23P-201ENST00000484055 275 ntBASIC10.95□□□□□ -0.66
CD28P10747 PPIA-208ENST00000489459 907 ntTSL 2 BASIC10.95□□□□□ -0.66
CD28P10747 AC026410.1-201ENST00000507366 1101 ntBASIC10.95□□□□□ -0.66
CD28P10747 PTK2-225ENST00000520892 571 ntTSL 4 BASIC10.95□□□□□ -0.66
CD28P10747 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC10.95□□□□□ -0.66
CD28P10747 VENTXP3-201ENST00000546480 773 ntBASIC10.95□□□□□ -0.66
CD28P10747 C2orf69P1-201ENST00000563532 1093 ntBASIC10.95□□□□□ -0.66
CD28P10747 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 RN7SL455P-201ENST00000580629 282 ntBASIC10.95□□□□□ -0.66
CD28P10747 MIR4265-201ENST00000582152 99 ntBASIC10.95□□□□□ -0.66
CD28P10747 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 PPIA-210ENST00000620047 827 ntTSL 5 BASIC10.95□□□□□ -0.66
CD28P10747 AC011471.3-201ENST00000623576 402 ntBASIC10.95□□□□□ -0.66
CD28P10747 AC138466.4-201ENST00000623965 852 ntBASIC10.95□□□□□ -0.66
CD28P10747 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
CD28P10747 AL451007.2-201ENST00000632004 563 ntBASIC10.95□□□□□ -0.66
CD28P10747 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC10.95□□□□□ -0.66
CD28P10747 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC10.95□□□□□ -0.66
CD28P10747 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC10.95□□□□□ -0.66
CD28P10747 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
CD28P10747 USP47-202ENST00000339865 7775 ntTSL 2 BASIC10.95□□□□□ -0.66
CD28P10747 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC10.95□□□□□ -0.66
CD28P10747 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC10.95□□□□□ -0.66
CD28P10747 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC10.95□□□□□ -0.66
CD28P10747 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC10.95□□□□□ -0.66
CD28P10747 AMT-256ENST00000638063 1783 ntTSL 5 BASIC10.95□□□□□ -0.66
CD28P10747 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC10.95□□□□□ -0.66
CD28P10747 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC10.95□□□□□ -0.66
CD28P10747 ODCP-201ENST00000459650 1639 ntBASIC10.95□□□□□ -0.66
CD28P10747 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CD28P10747 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CD28P10747 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CD28P10747 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
CD28P10747 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
CD28P10747 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
CD28P10747 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
CD28P10747 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC10.94□□□□□ -0.66
CD28P10747 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
CD28P10747 KRT8P43-201ENST00000406052 1458 ntBASIC10.94□□□□□ -0.66
CD28P10747 AC025183.3-201ENST00000623526 1482 ntBASIC10.94□□□□□ -0.66
CD28P10747 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
CD28P10747 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
CD28P10747 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
CD28P10747 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CD28P10747 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
CD28P10747 BANP-203ENST00000393207 2438 ntTSL 2 BASIC10.94□□□□□ -0.66
CD28P10747 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CD28P10747 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CD28P10747 AL590824.1-201ENST00000403828 1349 ntBASIC10.94□□□□□ -0.66
CD28P10747 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
CD28P10747 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC10.94□□□□□ -0.66
CD28P10747 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
CD28P10747 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CD28P10747 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CD28P10747 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
CD28P10747 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CD28P10747 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CD28P10747 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CD28P10747 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CD28P10747 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
CD28P10747 OR52M2P-201ENST00000414298 959 ntBASIC10.94□□□□□ -0.66
CD28P10747 ACTG1P19-201ENST00000418987 1116 ntBASIC10.94□□□□□ -0.66
CD28P10747 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC10.94□□□□□ -0.66
CD28P10747 AC108734.2-201ENST00000420887 1069 ntBASIC10.94□□□□□ -0.66
CD28P10747 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC10.94□□□□□ -0.66
CD28P10747 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CD28P10747 GOLGA2P8-201ENST00000505201 779 ntBASIC10.94□□□□□ -0.66
CD28P10747 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC10.94□□□□□ -0.66
CD28P10747 RN7SKP155-201ENST00000516031 288 ntBASIC10.94□□□□□ -0.66
CD28P10747 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC10.94□□□□□ -0.66
CD28P10747 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC10.94□□□□□ -0.66
CD28P10747 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CD28P10747 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC10.94□□□□□ -0.66
CD28P10747 SNORD3B-1-201ENST00000577988 758 ntBASIC10.94□□□□□ -0.66
CD28P10747 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC10.94□□□□□ -0.66
CD28P10747 HPX-213ENST00000615166 826 ntTSL 5 BASIC10.94□□□□□ -0.66
CD28P10747 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CD28P10747 HELLS-212ENST00000630929 400 ntTSL 5 BASIC10.94□□□□□ -0.66
CD28P10747 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC10.94□□□□□ -0.66
CD28P10747 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
CD28P10747 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CD28P10747 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
CD28P10747 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CD28P10747 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms