Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CTSBP07858 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CTSBP07858 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC13.12□□□□□ -0.31
CTSBP07858 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CTSBP07858 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CTSBP07858 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CTSBP07858 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.12□□□□□ -0.31
CTSBP07858 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CTSBP07858 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CTSBP07858 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CTSBP07858 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CTSBP07858 DKKL1P1-201ENST00000400550 698 ntBASIC13.12□□□□□ -0.31
CTSBP07858 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC13.12□□□□□ -0.31
CTSBP07858 LINP1-201ENST00000417112 917 ntTSL 2 BASIC13.12□□□□□ -0.31
CTSBP07858 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CTSBP07858 AC007279.1-201ENST00000448547 837 ntBASIC13.12□□□□□ -0.31
CTSBP07858 RN7SL23P-201ENST00000484055 275 ntBASIC13.12□□□□□ -0.31
CTSBP07858 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC13.12□□□□□ -0.31
CTSBP07858 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CTSBP07858 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC13.12□□□□□ -0.31
CTSBP07858 AC013553.1-201ENST00000560906 267 ntBASIC13.12□□□□□ -0.31
CTSBP07858 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC13.12□□□□□ -0.31
CTSBP07858 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC13.12□□□□□ -0.31
CTSBP07858 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC13.12□□□□□ -0.31
CTSBP07858 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC13.12□□□□□ -0.31
CTSBP07858 AC138466.5-201ENST00000624002 808 ntBASIC13.12□□□□□ -0.31
CTSBP07858 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC13.12□□□□□ -0.31
CTSBP07858 MANEA-AS1-201ENST00000564541 2268 ntBASIC13.12□□□□□ -0.31
CTSBP07858 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CTSBP07858 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.12□□□□□ -0.31
CTSBP07858 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CTSBP07858 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CTSBP07858 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC13.12□□□□□ -0.31
CTSBP07858 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CTSBP07858 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CTSBP07858 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.12□□□□□ -0.31
CTSBP07858 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.12□□□□□ -0.31
CTSBP07858 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CTSBP07858 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CTSBP07858 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CTSBP07858 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC13.12□□□□□ -0.31
CTSBP07858 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CTSBP07858 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
CTSBP07858 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
CTSBP07858 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSBP07858 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSBP07858 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSBP07858 AC126755.1-201ENST00000525846 6405 ntBASIC13.11□□□□□ -0.31
CTSBP07858 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.11□□□□□ -0.31
CTSBP07858 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CTSBP07858 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSBP07858 GK-205ENST00000378946 3638 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CTSBP07858 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSBP07858 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CTSBP07858 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CTSBP07858 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSBP07858 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CTSBP07858 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSBP07858 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSBP07858 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
CTSBP07858 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CTSBP07858 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC13.11□□□□□ -0.31
CTSBP07858 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSBP07858 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC13.11□□□□□ -0.31
CTSBP07858 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CTSBP07858 ALG1L6P-201ENST00000515248 758 ntBASIC13.11□□□□□ -0.31
CTSBP07858 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CTSBP07858 TREHP1-201ENST00000531328 465 ntBASIC13.11□□□□□ -0.31
CTSBP07858 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CTSBP07858 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC13.11□□□□□ -0.31
CTSBP07858 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC13.11□□□□□ -0.31
CTSBP07858 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC13.11□□□□□ -0.31
CTSBP07858 COX5A-205ENST00000568517 582 ntTSL 3 BASIC13.11□□□□□ -0.31
CTSBP07858 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC13.11□□□□□ -0.31
CTSBP07858 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CTSBP07858 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC13.11□□□□□ -0.31
CTSBP07858 MIR8071-1-201ENST00000616769 65 ntBASIC13.11□□□□□ -0.31
CTSBP07858 MIR8071-2-201ENST00000616772 65 ntBASIC13.11□□□□□ -0.31
CTSBP07858 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC13.11□□□□□ -0.31
CTSBP07858 AL451007.2-201ENST00000632004 563 ntBASIC13.11□□□□□ -0.31
CTSBP07858 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC13.11□□□□□ -0.31
CTSBP07858 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSBP07858 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSBP07858 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.11□□□□□ -0.31
CTSBP07858 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSBP07858 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSBP07858 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
CTSBP07858 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CTSBP07858 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSBP07858 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CTSBP07858 CTBP2P8-201ENST00000422584 1330 ntBASIC13.11□□□□□ -0.31
CTSBP07858 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CTSBP07858 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CTSBP07858 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC13.11□□□□□ -0.31
CTSBP07858 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.1□□□□□ -0.31
CTSBP07858 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.1□□□□□ -0.31
CTSBP07858 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSBP07858 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSBP07858 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CTSBP07858 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms