Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZIC3O60481 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ZIC3O60481 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.5□□□□□ -0.41
ZIC3O60481 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
ZIC3O60481 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZIC3O60481 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZIC3O60481 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.5□□□□□ -0.41
ZIC3O60481 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ZIC3O60481 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZIC3O60481 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZIC3O60481 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZIC3O60481 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
ZIC3O60481 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZIC3O60481 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZIC3O60481 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
ZIC3O60481 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
ZIC3O60481 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC12.49□□□□□ -0.41
ZIC3O60481 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.49□□□□□ -0.41
ZIC3O60481 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
ZIC3O60481 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
ZIC3O60481 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
ZIC3O60481 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
ZIC3O60481 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 ABCD1P2-201ENST00000429313 1601 ntBASIC12.49□□□□□ -0.41
ZIC3O60481 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
ZIC3O60481 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC12.49□□□□□ -0.41
ZIC3O60481 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC12.49□□□□□ -0.41
ZIC3O60481 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 AC018463.1-201ENST00000456674 917 ntBASIC12.49□□□□□ -0.41
ZIC3O60481 RN7SL8P-201ENST00000461771 266 ntBASIC12.49□□□□□ -0.41
ZIC3O60481 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC12.49□□□□□ -0.41
ZIC3O60481 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC12.49□□□□□ -0.41
ZIC3O60481 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC12.49□□□□□ -0.41
ZIC3O60481 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC12.49□□□□□ -0.41
ZIC3O60481 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC12.49□□□□□ -0.41
ZIC3O60481 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC12.49□□□□□ -0.41
ZIC3O60481 RN7SL736P-201ENST00000613111 269 ntBASIC12.49□□□□□ -0.41
ZIC3O60481 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 LINC00638-201ENST00000555578 2518 ntBASIC12.49□□□□□ -0.41
ZIC3O60481 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC12.49□□□□□ -0.41
ZIC3O60481 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
ZIC3O60481 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
ZIC3O60481 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.49□□□□□ -0.41
ZIC3O60481 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZIC3O60481 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
ZIC3O60481 AC010327.5-201ENST00000586923 3061 ntBASIC12.48□□□□□ -0.41
ZIC3O60481 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZIC3O60481 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ZIC3O60481 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZIC3O60481 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
ZIC3O60481 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZIC3O60481 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZIC3O60481 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZIC3O60481 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ZIC3O60481 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC12.48□□□□□ -0.41
ZIC3O60481 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ZIC3O60481 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
ZIC3O60481 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZIC3O60481 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZIC3O60481 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZIC3O60481 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC12.48□□□□□ -0.41
ZIC3O60481 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.48□□□□□ -0.41
ZIC3O60481 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.48□□□□□ -0.41
ZIC3O60481 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZIC3O60481 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZIC3O60481 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZIC3O60481 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZIC3O60481 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
ZIC3O60481 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
ZIC3O60481 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
ZIC3O60481 SSR4-202ENST00000370085 526 ntTSL 2 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms