Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LRCOL1A6NCL2 CAP2P1-201ENST00000557743 1390 ntBASIC9.47□□□□□ -0.89
LRCOL1A6NCL2 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC9.47□□□□□ -0.89
LRCOL1A6NCL2 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC9.47□□□□□ -0.89
LRCOL1A6NCL2 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LRCOL1A6NCL2 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LRCOL1A6NCL2 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LRCOL1A6NCL2 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
LRCOL1A6NCL2 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LRCOL1A6NCL2 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LRCOL1A6NCL2 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
LRCOL1A6NCL2 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
LRCOL1A6NCL2 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
LRCOL1A6NCL2 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC9.47□□□□□ -0.89
LRCOL1A6NCL2 TCF4-202ENST00000356073 8317 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
LRCOL1A6NCL2 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
LRCOL1A6NCL2 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
LRCOL1A6NCL2 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
LRCOL1A6NCL2 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
LRCOL1A6NCL2 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
LRCOL1A6NCL2 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC9.46□□□□□ -0.89
LRCOL1A6NCL2 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.89
LRCOL1A6NCL2 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.89
LRCOL1A6NCL2 AR-201ENST00000374690 10652 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
LRCOL1A6NCL2 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
LRCOL1A6NCL2 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
LRCOL1A6NCL2 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
LRCOL1A6NCL2 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
LRCOL1A6NCL2 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
LRCOL1A6NCL2 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
LRCOL1A6NCL2 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
LRCOL1A6NCL2 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 MIR557-201ENST00000385239 98 ntBASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 MPV17-204ENST00000399052 749 ntTSL 4 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 RPS9P1-201ENST00000419943 583 ntBASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 NEU3-205ENST00000531619 582 ntTSL 5 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 KRT8P1-201ENST00000557533 1207 ntBASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 CRTAP-201ENST00000320954 6630 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 ARHGAP23P1-201ENST00000562773 1937 ntBASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 GALC-206ENST00000544807 2528 ntTSL 2 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 GSN-209ENST00000449733 2702 ntTSL 2 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 MPI-203ENST00000535694 1523 ntTSL 2 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 CEP41-201ENST00000223208 6513 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 CACNA1C-213ENST00000399629 6562 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
LRCOL1A6NCL2 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
LRCOL1A6NCL2 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
LRCOL1A6NCL2 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
LRCOL1A6NCL2 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
LRCOL1A6NCL2 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms