Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 REXO1L1P-201ENST00000379010 6598 ntBASIC14.23□□□□□ -0.13
CCDC78A2IDD5 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 AC135782.3-201ENST00000562782 2105 ntBASIC14.23□□□□□ -0.13
CCDC78A2IDD5 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC78A2IDD5 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 GALNT7-201ENST00000265000 4307 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 AL445250.1-201ENST00000641671 2259 ntBASIC14.22□□□□□ -0.13
CCDC78A2IDD5 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 OR8T1P-201ENST00000421347 918 ntBASIC14.22□□□□□ -0.13
CCDC78A2IDD5 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 MARK2P5-201ENST00000507649 634 ntBASIC14.22□□□□□ -0.13
CCDC78A2IDD5 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 AC015909.3-201ENST00000572855 1794 ntBASIC14.22□□□□□ -0.13
CCDC78A2IDD5 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.22□□□□□ -0.13
CCDC78A2IDD5 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.21□□□□□ -0.13
CCDC78A2IDD5 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 TP73-201ENST00000346387 4854 ntTSL 5 BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CCDC78A2IDD5 AC067931.2-201ENST00000623655 2003 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms