Protein–RNA interactions for Protein: Q9Y661

HS3ST4, Heparan sulfate glucosamine 3-O-sulfotransferase 4, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST4Q9Y661 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HS3ST4Q9Y661 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HS3ST4Q9Y661 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HS3ST4Q9Y661 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HS3ST4Q9Y661 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.13■■□□□ 1.29
HS3ST4Q9Y661 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.13■■□□□ 1.29
HS3ST4Q9Y661 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
HS3ST4Q9Y661 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
HS3ST4Q9Y661 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.13■■□□□ 1.29
HS3ST4Q9Y661 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
HS3ST4Q9Y661 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
HS3ST4Q9Y661 LINC01529-204ENST00000636474 1715 ntBASIC23.13■■□□□ 1.29
HS3ST4Q9Y661 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
HS3ST4Q9Y661 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.12■■□□□ 1.29
HS3ST4Q9Y661 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.12■■□□□ 1.29
HS3ST4Q9Y661 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HS3ST4Q9Y661 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
HS3ST4Q9Y661 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
HS3ST4Q9Y661 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HS3ST4Q9Y661 UNC93B3-201ENST00000308076 687 ntBASIC23.12■■□□□ 1.29
HS3ST4Q9Y661 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
HS3ST4Q9Y661 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.12■■□□□ 1.29
HS3ST4Q9Y661 DUX4L4-201ENST00000566884 1269 ntBASIC23.12■■□□□ 1.29
HS3ST4Q9Y661 AC092068.2-201ENST00000590491 1708 ntBASIC23.12■■□□□ 1.29
HS3ST4Q9Y661 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
HS3ST4Q9Y661 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.12■■□□□ 1.29
HS3ST4Q9Y661 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
HS3ST4Q9Y661 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
HS3ST4Q9Y661 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HS3ST4Q9Y661 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
HS3ST4Q9Y661 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
HS3ST4Q9Y661 SYT6-210ENST00000641643 1587 ntBASIC23.11■■□□□ 1.29
HS3ST4Q9Y661 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.11■■□□□ 1.29
HS3ST4Q9Y661 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.11■■□□□ 1.29
HS3ST4Q9Y661 NALT1-201ENST00000429224 738 ntTSL 5 BASIC23.11■■□□□ 1.29
HS3ST4Q9Y661 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
HS3ST4Q9Y661 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.11■■□□□ 1.29
HS3ST4Q9Y661 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.11■■□□□ 1.29
HS3ST4Q9Y661 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
HS3ST4Q9Y661 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
HS3ST4Q9Y661 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
HS3ST4Q9Y661 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
HS3ST4Q9Y661 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC23.1■■□□□ 1.29
HS3ST4Q9Y661 AL353803.4-201ENST00000565882 1934 ntBASIC23.1■■□□□ 1.29
HS3ST4Q9Y661 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HS3ST4Q9Y661 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HS3ST4Q9Y661 SERBP1P1-201ENST00000396021 1160 ntBASIC23.1■■□□□ 1.29
HS3ST4Q9Y661 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
HS3ST4Q9Y661 DUX4L19-201ENST00000557448 1267 ntBASIC23.1■■□□□ 1.29
HS3ST4Q9Y661 AC110285.6-201ENST00000617652 491 ntBASIC23.1■■□□□ 1.29
HS3ST4Q9Y661 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.1■■□□□ 1.29
HS3ST4Q9Y661 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
HS3ST4Q9Y661 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HS3ST4Q9Y661 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HS3ST4Q9Y661 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
HS3ST4Q9Y661 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
HS3ST4Q9Y661 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.09■■□□□ 1.29
HS3ST4Q9Y661 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.09■■□□□ 1.29
HS3ST4Q9Y661 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
HS3ST4Q9Y661 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.09■■□□□ 1.29
HS3ST4Q9Y661 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.09■■□□□ 1.29
HS3ST4Q9Y661 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.09■■□□□ 1.29
HS3ST4Q9Y661 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.09■■□□□ 1.29
HS3ST4Q9Y661 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
HS3ST4Q9Y661 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
HS3ST4Q9Y661 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.09■■□□□ 1.29
HS3ST4Q9Y661 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HS3ST4Q9Y661 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.08■■□□□ 1.29
HS3ST4Q9Y661 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
HS3ST4Q9Y661 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
HS3ST4Q9Y661 pRNA.6-201ENST00000610482 90 ntBASIC23.08■■□□□ 1.29
HS3ST4Q9Y661 pRNA.5-201ENST00000612139 90 ntBASIC23.08■■□□□ 1.29
HS3ST4Q9Y661 pRNA.11-201ENST00000618423 90 ntBASIC23.08■■□□□ 1.29
HS3ST4Q9Y661 pRNA.13-201ENST00000619112 90 ntBASIC23.08■■□□□ 1.29
HS3ST4Q9Y661 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HS3ST4Q9Y661 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.08■■□□□ 1.29
HS3ST4Q9Y661 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
HS3ST4Q9Y661 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
HS3ST4Q9Y661 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
HS3ST4Q9Y661 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.08■■□□□ 1.28
HS3ST4Q9Y661 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HS3ST4Q9Y661 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.07■■□□□ 1.28
HS3ST4Q9Y661 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
HS3ST4Q9Y661 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
HS3ST4Q9Y661 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
HS3ST4Q9Y661 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HS3ST4Q9Y661 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
HS3ST4Q9Y661 MIR3181-201ENST00000578512 73 ntBASIC23.07■■□□□ 1.28
HS3ST4Q9Y661 AL139246.5-201ENST00000606645 996 ntBASIC23.07■■□□□ 1.28
HS3ST4Q9Y661 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.07■■□□□ 1.28
HS3ST4Q9Y661 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
HS3ST4Q9Y661 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.07■■□□□ 1.28
HS3ST4Q9Y661 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
HS3ST4Q9Y661 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
HS3ST4Q9Y661 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.06■■□□□ 1.28
HS3ST4Q9Y661 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
HS3ST4Q9Y661 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
HS3ST4Q9Y661 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
HS3ST4Q9Y661 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
HS3ST4Q9Y661 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms