Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC29.53■■■□□ 2.32
SPG7Q9UQ90 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
SPG7Q9UQ90 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC29.52■■■□□ 2.32
SPG7Q9UQ90 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC29.52■■■□□ 2.32
SPG7Q9UQ90 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC29.52■■■□□ 2.32
SPG7Q9UQ90 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC29.52■■■□□ 2.32
SPG7Q9UQ90 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC29.52■■■□□ 2.32
SPG7Q9UQ90 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC29.52■■■□□ 2.32
SPG7Q9UQ90 AC012414.1-201ENST00000556676 535 ntBASIC29.52■■■□□ 2.32
SPG7Q9UQ90 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC29.52■■■□□ 2.32
SPG7Q9UQ90 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC29.52■■■□□ 2.32
SPG7Q9UQ90 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC29.52■■■□□ 2.32
SPG7Q9UQ90 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
SPG7Q9UQ90 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC29.52■■■□□ 2.32
SPG7Q9UQ90 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
SPG7Q9UQ90 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC29.52■■■□□ 2.32
SPG7Q9UQ90 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
SPG7Q9UQ90 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
SPG7Q9UQ90 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC29.51■■■□□ 2.31
SPG7Q9UQ90 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC29.51■■■□□ 2.31
SPG7Q9UQ90 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC29.51■■■□□ 2.31
SPG7Q9UQ90 DUX4L4-201ENST00000566884 1269 ntBASIC29.51■■■□□ 2.31
SPG7Q9UQ90 AL354811.1-201ENST00000610286 706 ntBASIC29.51■■■□□ 2.31
SPG7Q9UQ90 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC29.51■■■□□ 2.31
SPG7Q9UQ90 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
SPG7Q9UQ90 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
SPG7Q9UQ90 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
SPG7Q9UQ90 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC29.5■■■□□ 2.31
SPG7Q9UQ90 OR2I1P-207ENST00000453522 948 ntBASIC29.5■■■□□ 2.31
SPG7Q9UQ90 IKBKGP1-201ENST00000612193 1073 ntBASIC29.5■■■□□ 2.31
SPG7Q9UQ90 MIR6084-201ENST00000622012 110 ntBASIC29.5■■■□□ 2.31
SPG7Q9UQ90 CREM-210ENST00000374721 2020 ntTSL 5 BASIC29.5■■■□□ 2.31
SPG7Q9UQ90 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC29.5■■■□□ 2.31
SPG7Q9UQ90 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
SPG7Q9UQ90 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC29.5■■■□□ 2.31
SPG7Q9UQ90 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
SPG7Q9UQ90 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC29.49■■■□□ 2.31
SPG7Q9UQ90 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC29.49■■■□□ 2.31
SPG7Q9UQ90 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC29.49■■■□□ 2.31
SPG7Q9UQ90 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC29.49■■■□□ 2.31
SPG7Q9UQ90 AC010525.1-201ENST00000585559 441 ntBASIC29.49■■■□□ 2.31
SPG7Q9UQ90 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
SPG7Q9UQ90 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
SPG7Q9UQ90 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SPG7Q9UQ90 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SPG7Q9UQ90 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
SPG7Q9UQ90 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
SPG7Q9UQ90 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
SPG7Q9UQ90 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC29.48■■■□□ 2.31
SPG7Q9UQ90 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SPG7Q9UQ90 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
SPG7Q9UQ90 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
SPG7Q9UQ90 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC29.48■■■□□ 2.31
SPG7Q9UQ90 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
SPG7Q9UQ90 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC29.48■■■□□ 2.31
SPG7Q9UQ90 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC29.48■■■□□ 2.31
SPG7Q9UQ90 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SPG7Q9UQ90 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SPG7Q9UQ90 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC29.47■■■□□ 2.31
SPG7Q9UQ90 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC29.47■■■□□ 2.31
SPG7Q9UQ90 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC29.47■■■□□ 2.31
SPG7Q9UQ90 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SPG7Q9UQ90 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC29.47■■■□□ 2.31
SPG7Q9UQ90 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
SPG7Q9UQ90 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC29.46■■■□□ 2.31
SPG7Q9UQ90 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
SPG7Q9UQ90 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
SPG7Q9UQ90 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC29.46■■■□□ 2.31
SPG7Q9UQ90 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
SPG7Q9UQ90 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC29.46■■■□□ 2.31
SPG7Q9UQ90 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC29.46■■■□□ 2.31
SPG7Q9UQ90 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC29.46■■■□□ 2.31
SPG7Q9UQ90 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC29.46■■■□□ 2.31
SPG7Q9UQ90 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC29.46■■■□□ 2.31
SPG7Q9UQ90 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC29.45■■■□□ 2.31
SPG7Q9UQ90 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.31
SPG7Q9UQ90 EI24-213ENST00000618552 1747 ntTSL 5 BASIC29.45■■■□□ 2.31
SPG7Q9UQ90 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
SPG7Q9UQ90 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
SPG7Q9UQ90 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC29.45■■■□□ 2.31
SPG7Q9UQ90 RARRES2P11-201ENST00000635158 484 ntBASIC29.45■■■□□ 2.31
SPG7Q9UQ90 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.3
SPG7Q9UQ90 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC29.45■■■□□ 2.3
SPG7Q9UQ90 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SPG7Q9UQ90 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
SPG7Q9UQ90 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC29.44■■■□□ 2.3
SPG7Q9UQ90 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
SPG7Q9UQ90 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC29.44■■■□□ 2.3
SPG7Q9UQ90 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
SPG7Q9UQ90 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC29.44■■■□□ 2.3
SPG7Q9UQ90 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SPG7Q9UQ90 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
SPG7Q9UQ90 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SPG7Q9UQ90 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
SPG7Q9UQ90 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC29.44■■■□□ 2.3
SPG7Q9UQ90 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
SPG7Q9UQ90 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
SPG7Q9UQ90 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
SPG7Q9UQ90 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
SPG7Q9UQ90 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms