Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
MACF1Q9UPN3 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
MACF1Q9UPN3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
MACF1Q9UPN3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
MACF1Q9UPN3 TK2-213ENST00000563369 882 ntTSL 5 BASIC9.48□□□□□ -0.89
MACF1Q9UPN3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
MACF1Q9UPN3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC9.48□□□□□ -0.89
MACF1Q9UPN3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC9.48□□□□□ -0.89
MACF1Q9UPN3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC9.48□□□□□ -0.89
MACF1Q9UPN3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
MACF1Q9UPN3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
MACF1Q9UPN3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
MACF1Q9UPN3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC9.48□□□□□ -0.89
MACF1Q9UPN3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
MACF1Q9UPN3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
MACF1Q9UPN3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
MACF1Q9UPN3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC9.48□□□□□ -0.89
MACF1Q9UPN3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
MACF1Q9UPN3 AC007322.1-201ENST00000426983 750 ntBASIC9.48□□□□□ -0.89
MACF1Q9UPN3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
MACF1Q9UPN3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
MACF1Q9UPN3 C2orf69P4-201ENST00000565394 541 ntBASIC9.48□□□□□ -0.89
MACF1Q9UPN3 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC9.48□□□□□ -0.89
MACF1Q9UPN3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
MACF1Q9UPN3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
MACF1Q9UPN3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
MACF1Q9UPN3 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
MACF1Q9UPN3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
MACF1Q9UPN3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC9.47□□□□□ -0.89
MACF1Q9UPN3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
MACF1Q9UPN3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
MACF1Q9UPN3 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
MACF1Q9UPN3 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC9.47□□□□□ -0.89
MACF1Q9UPN3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC9.47□□□□□ -0.89
MACF1Q9UPN3 UBE2SP1-201ENST00000450587 669 ntBASIC9.47□□□□□ -0.89
MACF1Q9UPN3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
MACF1Q9UPN3 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
MACF1Q9UPN3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC9.46□□□□□ -0.89
MACF1Q9UPN3 pRNA.6-201ENST00000610482 90 ntBASIC9.46□□□□□ -0.89
MACF1Q9UPN3 pRNA.5-201ENST00000612139 90 ntBASIC9.46□□□□□ -0.89
MACF1Q9UPN3 pRNA.11-201ENST00000618423 90 ntBASIC9.46□□□□□ -0.89
MACF1Q9UPN3 pRNA.13-201ENST00000619112 90 ntBASIC9.46□□□□□ -0.89
MACF1Q9UPN3 AC091060.1-201ENST00000623524 1766 ntBASIC9.46□□□□□ -0.89
MACF1Q9UPN3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
MACF1Q9UPN3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
MACF1Q9UPN3 REXO1L12P-201ENST00000622156 912 ntBASIC9.46□□□□□ -0.89
MACF1Q9UPN3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
MACF1Q9UPN3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
MACF1Q9UPN3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC9.46□□□□□ -0.9
MACF1Q9UPN3 AC006058.3-201ENST00000606217 1069 ntBASIC9.46□□□□□ -0.9
MACF1Q9UPN3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
MACF1Q9UPN3 POU5F1P4-201ENST00000413175 1085 ntBASIC9.46□□□□□ -0.9
MACF1Q9UPN3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC9.46□□□□□ -0.9
MACF1Q9UPN3 AF201337.1-201ENST00000520239 748 ntBASIC9.46□□□□□ -0.9
MACF1Q9UPN3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC9.46□□□□□ -0.9
MACF1Q9UPN3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
MACF1Q9UPN3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC9.46□□□□□ -0.9
MACF1Q9UPN3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC9.46□□□□□ -0.9
MACF1Q9UPN3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
MACF1Q9UPN3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC9.46□□□□□ -0.9
MACF1Q9UPN3 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC9.46□□□□□ -0.9
MACF1Q9UPN3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC9.45□□□□□ -0.9
MACF1Q9UPN3 MARS-234ENST00000630571 216 ntTSL 5 BASIC9.45□□□□□ -0.9
MACF1Q9UPN3 MARS-235ENST00000630803 183 ntTSL 3 BASIC9.45□□□□□ -0.9
MACF1Q9UPN3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
MACF1Q9UPN3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
MACF1Q9UPN3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC9.45□□□□□ -0.9
MACF1Q9UPN3 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC9.45□□□□□ -0.9
MACF1Q9UPN3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
MACF1Q9UPN3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
MACF1Q9UPN3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC9.45□□□□□ -0.9
MACF1Q9UPN3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC9.45□□□□□ -0.9
MACF1Q9UPN3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC9.45□□□□□ -0.9
MACF1Q9UPN3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC9.45□□□□□ -0.9
MACF1Q9UPN3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC9.45□□□□□ -0.9
MACF1Q9UPN3 AC133561.5-201ENST00000635547 218 ntBASIC9.45□□□□□ -0.9
MACF1Q9UPN3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
MACF1Q9UPN3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC9.45□□□□□ -0.9
MACF1Q9UPN3 BX255925.1-201ENST00000566954 1854 ntBASIC9.45□□□□□ -0.9
MACF1Q9UPN3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
MACF1Q9UPN3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
MACF1Q9UPN3 AC073648.6-201ENST00000641589 218 ntBASIC9.45□□□□□ -0.9
MACF1Q9UPN3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
MACF1Q9UPN3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
MACF1Q9UPN3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
MACF1Q9UPN3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
MACF1Q9UPN3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
MACF1Q9UPN3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
MACF1Q9UPN3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
MACF1Q9UPN3 RN7SL850P-201ENST00000579959 291 ntBASIC9.44□□□□□ -0.9
MACF1Q9UPN3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
MACF1Q9UPN3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
MACF1Q9UPN3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC9.44□□□□□ -0.9
MACF1Q9UPN3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
MACF1Q9UPN3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
MACF1Q9UPN3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC9.44□□□□□ -0.9
MACF1Q9UPN3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
MACF1Q9UPN3 ESRRAP1-201ENST00000400596 1257 ntBASIC9.44□□□□□ -0.9
MACF1Q9UPN3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC9.44□□□□□ -0.9
MACF1Q9UPN3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC9.44□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms