Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUP50Q9UKX7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.4■□□□□ 0.7
NUP50Q9UKX7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
NUP50Q9UKX7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.4■□□□□ 0.7
NUP50Q9UKX7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUP50Q9UKX7 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.4■□□□□ 0.7
NUP50Q9UKX7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUP50Q9UKX7 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUP50Q9UKX7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
NUP50Q9UKX7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NUP50Q9UKX7 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
NUP50Q9UKX7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
NUP50Q9UKX7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUP50Q9UKX7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUP50Q9UKX7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NUP50Q9UKX7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.39■□□□□ 0.7
NUP50Q9UKX7 AC127496.7-201ENST00000625110 1798 ntBASIC19.39■□□□□ 0.7
NUP50Q9UKX7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
NUP50Q9UKX7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.7
NUP50Q9UKX7 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NUP50Q9UKX7 AC120024.1-201ENST00000562672 995 ntBASIC19.39■□□□□ 0.69
NUP50Q9UKX7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NUP50Q9UKX7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.39■□□□□ 0.69
NUP50Q9UKX7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
NUP50Q9UKX7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
NUP50Q9UKX7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
NUP50Q9UKX7 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.38■□□□□ 0.69
NUP50Q9UKX7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUP50Q9UKX7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUP50Q9UKX7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUP50Q9UKX7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUP50Q9UKX7 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUP50Q9UKX7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
NUP50Q9UKX7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUP50Q9UKX7 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUP50Q9UKX7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUP50Q9UKX7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUP50Q9UKX7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUP50Q9UKX7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
NUP50Q9UKX7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUP50Q9UKX7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.38■□□□□ 0.69
NUP50Q9UKX7 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.38■□□□□ 0.69
NUP50Q9UKX7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NUP50Q9UKX7 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.38■□□□□ 0.69
NUP50Q9UKX7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NUP50Q9UKX7 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.38■□□□□ 0.69
NUP50Q9UKX7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.38■□□□□ 0.69
NUP50Q9UKX7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NUP50Q9UKX7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.37■□□□□ 0.69
NUP50Q9UKX7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NUP50Q9UKX7 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.37■□□□□ 0.69
NUP50Q9UKX7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUP50Q9UKX7 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.37■□□□□ 0.69
NUP50Q9UKX7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUP50Q9UKX7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NUP50Q9UKX7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.37■□□□□ 0.69
NUP50Q9UKX7 AC137630.3-201ENST00000607245 391 ntBASIC19.37■□□□□ 0.69
NUP50Q9UKX7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.37■□□□□ 0.69
NUP50Q9UKX7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.37■□□□□ 0.69
NUP50Q9UKX7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NUP50Q9UKX7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.37■□□□□ 0.69
NUP50Q9UKX7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
NUP50Q9UKX7 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
NUP50Q9UKX7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NUP50Q9UKX7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.36■□□□□ 0.69
NUP50Q9UKX7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.36■□□□□ 0.69
NUP50Q9UKX7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.36■□□□□ 0.69
NUP50Q9UKX7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC19.36■□□□□ 0.69
NUP50Q9UKX7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
NUP50Q9UKX7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NUP50Q9UKX7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.36■□□□□ 0.69
NUP50Q9UKX7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NUP50Q9UKX7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
NUP50Q9UKX7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NUP50Q9UKX7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NUP50Q9UKX7 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NUP50Q9UKX7 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.35■□□□□ 0.69
NUP50Q9UKX7 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NUP50Q9UKX7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
NUP50Q9UKX7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.35■□□□□ 0.69
NUP50Q9UKX7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
NUP50Q9UKX7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
NUP50Q9UKX7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
NUP50Q9UKX7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.34■□□□□ 0.69
NUP50Q9UKX7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NUP50Q9UKX7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.34■□□□□ 0.69
NUP50Q9UKX7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NUP50Q9UKX7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
NUP50Q9UKX7 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.34■□□□□ 0.69
NUP50Q9UKX7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NUP50Q9UKX7 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.34■□□□□ 0.69
NUP50Q9UKX7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NUP50Q9UKX7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.34■□□□□ 0.69
NUP50Q9UKX7 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NUP50Q9UKX7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NUP50Q9UKX7 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.69
NUP50Q9UKX7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NUP50Q9UKX7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.33■□□□□ 0.69
NUP50Q9UKX7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.33■□□□□ 0.68
NUP50Q9UKX7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms