Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LIN7CQ9NUP9 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LIN7CQ9NUP9 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.54■□□□□ 0.56
LIN7CQ9NUP9 AL451085.2-201ENST00000605085 799 ntBASIC18.54■□□□□ 0.56
LIN7CQ9NUP9 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LIN7CQ9NUP9 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LIN7CQ9NUP9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LIN7CQ9NUP9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LIN7CQ9NUP9 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
LIN7CQ9NUP9 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.54■□□□□ 0.56
LIN7CQ9NUP9 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LIN7CQ9NUP9 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LIN7CQ9NUP9 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.54■□□□□ 0.56
LIN7CQ9NUP9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LIN7CQ9NUP9 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LIN7CQ9NUP9 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.53■□□□□ 0.56
LIN7CQ9NUP9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.53■□□□□ 0.56
LIN7CQ9NUP9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
LIN7CQ9NUP9 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LIN7CQ9NUP9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.53■□□□□ 0.56
LIN7CQ9NUP9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LIN7CQ9NUP9 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.53■□□□□ 0.56
LIN7CQ9NUP9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.53■□□□□ 0.56
LIN7CQ9NUP9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LIN7CQ9NUP9 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LIN7CQ9NUP9 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LIN7CQ9NUP9 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.53■□□□□ 0.56
LIN7CQ9NUP9 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LIN7CQ9NUP9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LIN7CQ9NUP9 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.52■□□□□ 0.56
LIN7CQ9NUP9 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.52■□□□□ 0.56
LIN7CQ9NUP9 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LIN7CQ9NUP9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.52■□□□□ 0.56
LIN7CQ9NUP9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LIN7CQ9NUP9 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.52■□□□□ 0.56
LIN7CQ9NUP9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.55
LIN7CQ9NUP9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LIN7CQ9NUP9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.55
LIN7CQ9NUP9 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LIN7CQ9NUP9 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
LIN7CQ9NUP9 GUSBP5-202ENST00000510805 1989 ntBASIC18.51■□□□□ 0.55
LIN7CQ9NUP9 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LIN7CQ9NUP9 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LIN7CQ9NUP9 AC131274.2-201ENST00000580697 1507 ntBASIC18.51■□□□□ 0.55
LIN7CQ9NUP9 AC009299.2-201ENST00000482477 511 ntBASIC18.51■□□□□ 0.55
LIN7CQ9NUP9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LIN7CQ9NUP9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.51■□□□□ 0.55
LIN7CQ9NUP9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LIN7CQ9NUP9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LIN7CQ9NUP9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
LIN7CQ9NUP9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
LIN7CQ9NUP9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
LIN7CQ9NUP9 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LIN7CQ9NUP9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LIN7CQ9NUP9 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LIN7CQ9NUP9 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
LIN7CQ9NUP9 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LIN7CQ9NUP9 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.5■□□□□ 0.55
LIN7CQ9NUP9 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LIN7CQ9NUP9 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LIN7CQ9NUP9 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LIN7CQ9NUP9 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LIN7CQ9NUP9 BX664725.1-201ENST00000438252 379 ntBASIC18.5■□□□□ 0.55
LIN7CQ9NUP9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.5■□□□□ 0.55
LIN7CQ9NUP9 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LIN7CQ9NUP9 AC137630.3-201ENST00000607245 391 ntBASIC18.5■□□□□ 0.55
LIN7CQ9NUP9 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
LIN7CQ9NUP9 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LIN7CQ9NUP9 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LIN7CQ9NUP9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
LIN7CQ9NUP9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LIN7CQ9NUP9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LIN7CQ9NUP9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LIN7CQ9NUP9 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LIN7CQ9NUP9 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.49■□□□□ 0.55
LIN7CQ9NUP9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LIN7CQ9NUP9 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LIN7CQ9NUP9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LIN7CQ9NUP9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
LIN7CQ9NUP9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
LIN7CQ9NUP9 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LIN7CQ9NUP9 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
LIN7CQ9NUP9 EP400NL-214ENST00000641289 2402 ntBASIC18.49■□□□□ 0.55
LIN7CQ9NUP9 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LIN7CQ9NUP9 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LIN7CQ9NUP9 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LIN7CQ9NUP9 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LIN7CQ9NUP9 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LIN7CQ9NUP9 Z92544.1-202ENST00000571933 1220 ntBASIC18.48■□□□□ 0.55
LIN7CQ9NUP9 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.48■□□□□ 0.55
LIN7CQ9NUP9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LIN7CQ9NUP9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
LIN7CQ9NUP9 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
LIN7CQ9NUP9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LIN7CQ9NUP9 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LIN7CQ9NUP9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LIN7CQ9NUP9 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
LIN7CQ9NUP9 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LIN7CQ9NUP9 CLDN5-201ENST00000403084 2357 ntBASIC18.47■□□□□ 0.55
LIN7CQ9NUP9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms