Protein–RNA interactions for Protein: Q9NRJ4

TULP4, Tubby-related protein 4, humanhuman

Predictions only

Length 1,543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4Q9NRJ4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
TULP4Q9NRJ4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC31.32■■■□□ 2.6
TULP4Q9NRJ4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC31.32■■■□□ 2.6
TULP4Q9NRJ4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC31.32■■■□□ 2.6
TULP4Q9NRJ4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC31.32■■■□□ 2.6
TULP4Q9NRJ4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
TULP4Q9NRJ4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC31.31■■■□□ 2.6
TULP4Q9NRJ4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
TULP4Q9NRJ4 AC012414.1-201ENST00000556676 535 ntBASIC31.31■■■□□ 2.6
TULP4Q9NRJ4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
TULP4Q9NRJ4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
TULP4Q9NRJ4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
TULP4Q9NRJ4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
TULP4Q9NRJ4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC31.31■■■□□ 2.6
TULP4Q9NRJ4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
TULP4Q9NRJ4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC31.3■■■□□ 2.6
TULP4Q9NRJ4 RAB43-208ENST00000615093 783 ntTSL 5 BASIC31.3■■■□□ 2.6
TULP4Q9NRJ4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC31.3■■■□□ 2.6
TULP4Q9NRJ4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
TULP4Q9NRJ4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC31.3■■■□□ 2.6
TULP4Q9NRJ4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
TULP4Q9NRJ4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
TULP4Q9NRJ4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC31.29■■■□□ 2.6
TULP4Q9NRJ4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
TULP4Q9NRJ4 AC092437.1-201ENST00000624794 1048 ntBASIC31.29■■■□□ 2.6
TULP4Q9NRJ4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC31.29■■■□□ 2.6
TULP4Q9NRJ4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
TULP4Q9NRJ4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
TULP4Q9NRJ4 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
TULP4Q9NRJ4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
TULP4Q9NRJ4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
TULP4Q9NRJ4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
TULP4Q9NRJ4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
TULP4Q9NRJ4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TULP4Q9NRJ4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC31.28■■■□□ 2.6
TULP4Q9NRJ4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC31.28■■■□□ 2.6
TULP4Q9NRJ4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC31.28■■■□□ 2.6
TULP4Q9NRJ4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC31.27■■■□□ 2.6
TULP4Q9NRJ4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
TULP4Q9NRJ4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
TULP4Q9NRJ4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
TULP4Q9NRJ4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC31.27■■■□□ 2.6
TULP4Q9NRJ4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC31.27■■■□□ 2.6
TULP4Q9NRJ4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC31.26■■■□□ 2.6
TULP4Q9NRJ4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC31.26■■■□□ 2.59
TULP4Q9NRJ4 AC090192.1-201ENST00000517740 490 ntBASIC31.26■■■□□ 2.59
TULP4Q9NRJ4 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC31.26■■■□□ 2.59
TULP4Q9NRJ4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
TULP4Q9NRJ4 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC31.26■■■□□ 2.59
TULP4Q9NRJ4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
TULP4Q9NRJ4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC31.26■■■□□ 2.59
TULP4Q9NRJ4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC31.25■■■□□ 2.59
TULP4Q9NRJ4 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC31.25■■■□□ 2.59
TULP4Q9NRJ4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC31.25■■■□□ 2.59
TULP4Q9NRJ4 AL499627.2-201ENST00000606283 725 ntBASIC31.25■■■□□ 2.59
TULP4Q9NRJ4 AL358852.1-201ENST00000623174 1268 ntBASIC31.25■■■□□ 2.59
TULP4Q9NRJ4 RARRES2P11-201ENST00000635158 484 ntBASIC31.25■■■□□ 2.59
TULP4Q9NRJ4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
TULP4Q9NRJ4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC31.25■■■□□ 2.59
TULP4Q9NRJ4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
TULP4Q9NRJ4 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
TULP4Q9NRJ4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC31.24■■■□□ 2.59
TULP4Q9NRJ4 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC31.24■■■□□ 2.59
TULP4Q9NRJ4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC31.24■■■□□ 2.59
TULP4Q9NRJ4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC31.24■■■□□ 2.59
TULP4Q9NRJ4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
TULP4Q9NRJ4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
TULP4Q9NRJ4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
TULP4Q9NRJ4 NME4-202ENST00000382940 766 ntTSL 3 BASIC31.24■■■□□ 2.59
TULP4Q9NRJ4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC31.24■■■□□ 2.59
TULP4Q9NRJ4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
TULP4Q9NRJ4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC31.23■■■□□ 2.59
TULP4Q9NRJ4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC31.23■■■□□ 2.59
TULP4Q9NRJ4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
TULP4Q9NRJ4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
TULP4Q9NRJ4 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC31.23■■■□□ 2.59
TULP4Q9NRJ4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC31.23■■■□□ 2.59
TULP4Q9NRJ4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
TULP4Q9NRJ4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
TULP4Q9NRJ4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
TULP4Q9NRJ4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
TULP4Q9NRJ4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
TULP4Q9NRJ4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC31.23■■■□□ 2.59
TULP4Q9NRJ4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC31.23■■■□□ 2.59
TULP4Q9NRJ4 MIR572-201ENST00000384983 95 ntBASIC31.23■■■□□ 2.59
TULP4Q9NRJ4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
TULP4Q9NRJ4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC31.23■■■□□ 2.59
TULP4Q9NRJ4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
TULP4Q9NRJ4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
TULP4Q9NRJ4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC31.22■■■□□ 2.59
TULP4Q9NRJ4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
TULP4Q9NRJ4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
TULP4Q9NRJ4 AC123595.1-201ENST00000440769 1046 ntBASIC31.22■■■□□ 2.59
TULP4Q9NRJ4 OR2I1P-207ENST00000453522 948 ntBASIC31.22■■■□□ 2.59
TULP4Q9NRJ4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC31.22■■■□□ 2.59
TULP4Q9NRJ4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC31.22■■■□□ 2.59
TULP4Q9NRJ4 AC022517.1-201ENST00000592429 346 ntBASIC31.22■■■□□ 2.59
TULP4Q9NRJ4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
TULP4Q9NRJ4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC31.22■■■□□ 2.59
TULP4Q9NRJ4 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC31.22■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms