Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Q9N2K0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Q9N2K0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.74■□□□□ 0.59
Q9N2K0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Q9N2K0 TSPY13P-201ENST00000338964 914 ntBASIC18.73■□□□□ 0.59
Q9N2K0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.73■□□□□ 0.59
Q9N2K0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Q9N2K0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Q9N2K0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Q9N2K0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.73■□□□□ 0.59
Q9N2K0 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Q9N2K0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.72■□□□□ 0.59
Q9N2K0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q9N2K0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
Q9N2K0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Q9N2K0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Q9N2K0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Q9N2K0 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q9N2K0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.72■□□□□ 0.59
Q9N2K0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.72■□□□□ 0.59
Q9N2K0 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.72■□□□□ 0.59
Q9N2K0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Q9N2K0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.72■□□□□ 0.59
Q9N2K0 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.72■□□□□ 0.59
Q9N2K0 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Q9N2K0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.72■□□□□ 0.59
Q9N2K0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q9N2K0 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q9N2K0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Q9N2K0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Q9N2K0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Q9N2K0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.71■□□□□ 0.59
Q9N2K0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q9N2K0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Q9N2K0 LINC00565-201ENST00000562710 2331 ntBASIC18.71■□□□□ 0.59
Q9N2K0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.71■□□□□ 0.59
Q9N2K0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.71■□□□□ 0.59
Q9N2K0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.71■□□□□ 0.59
Q9N2K0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q9N2K0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Q9N2K0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Q9N2K0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Q9N2K0 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.7■□□□□ 0.58
Q9N2K0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.7■□□□□ 0.58
Q9N2K0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q9N2K0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Q9N2K0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Q9N2K0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q9N2K0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q9N2K0 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q9N2K0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Q9N2K0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.7■□□□□ 0.58
Q9N2K0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Q9N2K0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.7■□□□□ 0.58
Q9N2K0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.7■□□□□ 0.58
Q9N2K0 AL353803.4-201ENST00000565882 1934 ntBASIC18.7■□□□□ 0.58
Q9N2K0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Q9N2K0 AC127496.7-201ENST00000625110 1798 ntBASIC18.7■□□□□ 0.58
Q9N2K0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Q9N2K0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q9N2K0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.69■□□□□ 0.58
Q9N2K0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.69■□□□□ 0.58
Q9N2K0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.69■□□□□ 0.58
Q9N2K0 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Q9N2K0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Q9N2K0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
Q9N2K0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q9N2K0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.68■□□□□ 0.58
Q9N2K0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q9N2K0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q9N2K0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Q9N2K0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.68■□□□□ 0.58
Q9N2K0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.68■□□□□ 0.58
Q9N2K0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Q9N2K0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.68■□□□□ 0.58
Q9N2K0 MIR4508-201ENST00000584178 70 ntBASIC18.68■□□□□ 0.58
Q9N2K0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q9N2K0 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q9N2K0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.68■□□□□ 0.58
Q9N2K0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.68■□□□□ 0.58
Q9N2K0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q9N2K0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Q9N2K0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q9N2K0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q9N2K0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q9N2K0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Q9N2K0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q9N2K0 AC242852.2-201ENST00000615738 1807 ntBASIC18.67■□□□□ 0.58
Q9N2K0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.67■□□□□ 0.58
Q9N2K0 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q9N2K0 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.67■□□□□ 0.58
Q9N2K0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q9N2K0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Q9N2K0 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q9N2K0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Q9N2K0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.67■□□□□ 0.58
Q9N2K0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.67■□□□□ 0.58
Q9N2K0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Q9N2K0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.67■□□□□ 0.58
Q9N2K0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms