Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CD248Q9HCU0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
CD248Q9HCU0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
CD248Q9HCU0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CD248Q9HCU0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CD248Q9HCU0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CD248Q9HCU0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
CD248Q9HCU0 SLC25A24-204ENST00000569674 2357 ntBASIC23.33■■□□□ 1.32
CD248Q9HCU0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
CD248Q9HCU0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CD248Q9HCU0 AL117328.2-201ENST00000624617 1940 ntBASIC23.32■■□□□ 1.32
CD248Q9HCU0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
CD248Q9HCU0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.32■■□□□ 1.32
CD248Q9HCU0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.32■■□□□ 1.32
CD248Q9HCU0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
CD248Q9HCU0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CD248Q9HCU0 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CD248Q9HCU0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
CD248Q9HCU0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CD248Q9HCU0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CD248Q9HCU0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CD248Q9HCU0 ZNRF2P3-201ENST00000424200 374 ntBASIC23.31■■□□□ 1.32
CD248Q9HCU0 SRD5A1P1-201ENST00000442297 786 ntBASIC23.31■■□□□ 1.32
CD248Q9HCU0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.31■■□□□ 1.32
CD248Q9HCU0 AL136162.1-201ENST00000607711 1078 ntBASIC23.31■■□□□ 1.32
CD248Q9HCU0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.31■■□□□ 1.32
CD248Q9HCU0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CD248Q9HCU0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CD248Q9HCU0 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
CD248Q9HCU0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
CD248Q9HCU0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.31■■□□□ 1.32
CD248Q9HCU0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.3■■□□□ 1.32
CD248Q9HCU0 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.3■■□□□ 1.32
CD248Q9HCU0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CD248Q9HCU0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CD248Q9HCU0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.3■■□□□ 1.32
CD248Q9HCU0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CD248Q9HCU0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
CD248Q9HCU0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CD248Q9HCU0 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CD248Q9HCU0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CD248Q9HCU0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CD248Q9HCU0 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CD248Q9HCU0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.29■■□□□ 1.32
CD248Q9HCU0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
CD248Q9HCU0 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CD248Q9HCU0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.29■■□□□ 1.32
CD248Q9HCU0 MIR6089-201ENST00000616698 64 ntBASIC23.29■■□□□ 1.32
CD248Q9HCU0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
CD248Q9HCU0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.29■■□□□ 1.32
CD248Q9HCU0 AC135279.3-201ENST00000610945 1311 ntBASIC23.29■■□□□ 1.32
CD248Q9HCU0 AC005703.6-201ENST00000623265 1329 ntBASIC23.29■■□□□ 1.32
CD248Q9HCU0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CD248Q9HCU0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CD248Q9HCU0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CD248Q9HCU0 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC23.28■■□□□ 1.32
CD248Q9HCU0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CD248Q9HCU0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
CD248Q9HCU0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.28■■□□□ 1.32
CD248Q9HCU0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.28■■□□□ 1.32
CD248Q9HCU0 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
CD248Q9HCU0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CD248Q9HCU0 AC024257.2-201ENST00000549699 147 ntBASIC23.28■■□□□ 1.32
CD248Q9HCU0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.28■■□□□ 1.32
CD248Q9HCU0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CD248Q9HCU0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CD248Q9HCU0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CD248Q9HCU0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.27■■□□□ 1.32
CD248Q9HCU0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
CD248Q9HCU0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CD248Q9HCU0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
CD248Q9HCU0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CD248Q9HCU0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.27■■□□□ 1.32
CD248Q9HCU0 AC142381.2-201ENST00000566120 298 ntBASIC23.27■■□□□ 1.32
CD248Q9HCU0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CD248Q9HCU0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.27■■□□□ 1.32
CD248Q9HCU0 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.27■■□□□ 1.32
CD248Q9HCU0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CD248Q9HCU0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
CD248Q9HCU0 EP400NL-214ENST00000641289 2402 ntBASIC23.26■■□□□ 1.31
CD248Q9HCU0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.26■■□□□ 1.31
CD248Q9HCU0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.26■■□□□ 1.31
CD248Q9HCU0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CD248Q9HCU0 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
CD248Q9HCU0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.26■■□□□ 1.31
CD248Q9HCU0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CD248Q9HCU0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.25■■□□□ 1.31
CD248Q9HCU0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
CD248Q9HCU0 EDA-201ENST00000338901 1233 ntBASIC23.25■■□□□ 1.31
CD248Q9HCU0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CD248Q9HCU0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.25■■□□□ 1.31
CD248Q9HCU0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.25■■□□□ 1.31
CD248Q9HCU0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CD248Q9HCU0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CD248Q9HCU0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CD248Q9HCU0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CD248Q9HCU0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CD248Q9HCU0 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.24■■□□□ 1.31
CD248Q9HCU0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
CD248Q9HCU0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms