Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CHD8Q9HCK8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.27■■□□□ 1
CHD8Q9HCK8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CHD8Q9HCK8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHD8Q9HCK8 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CHD8Q9HCK8 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHD8Q9HCK8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.27■■□□□ 1
CHD8Q9HCK8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CHD8Q9HCK8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHD8Q9HCK8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
CHD8Q9HCK8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CHD8Q9HCK8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.27■□□□□ 0.99
CHD8Q9HCK8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CHD8Q9HCK8 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.26■□□□□ 0.99
CHD8Q9HCK8 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHD8Q9HCK8 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHD8Q9HCK8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CHD8Q9HCK8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
CHD8Q9HCK8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHD8Q9HCK8 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHD8Q9HCK8 AC005181.1-201ENST00000604782 1256 ntBASIC21.26■□□□□ 0.99
CHD8Q9HCK8 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CHD8Q9HCK8 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHD8Q9HCK8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHD8Q9HCK8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.25■□□□□ 0.99
CHD8Q9HCK8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHD8Q9HCK8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.25■□□□□ 0.99
CHD8Q9HCK8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.25■□□□□ 0.99
CHD8Q9HCK8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC21.25■□□□□ 0.99
CHD8Q9HCK8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD8Q9HCK8 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHD8Q9HCK8 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.25■□□□□ 0.99
CHD8Q9HCK8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHD8Q9HCK8 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.25■□□□□ 0.99
CHD8Q9HCK8 DUX4L4-201ENST00000566884 1269 ntBASIC21.25■□□□□ 0.99
CHD8Q9HCK8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHD8Q9HCK8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHD8Q9HCK8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD8Q9HCK8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHD8Q9HCK8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.24■□□□□ 0.99
CHD8Q9HCK8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CHD8Q9HCK8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CHD8Q9HCK8 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD8Q9HCK8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD8Q9HCK8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHD8Q9HCK8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CHD8Q9HCK8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD8Q9HCK8 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD8Q9HCK8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.24■□□□□ 0.99
CHD8Q9HCK8 RPS2P4-201ENST00000476944 856 ntBASIC21.24■□□□□ 0.99
CHD8Q9HCK8 AF201337.1-201ENST00000520239 748 ntBASIC21.24■□□□□ 0.99
CHD8Q9HCK8 SLC7A5P1-201ENST00000568957 537 ntBASIC21.24■□□□□ 0.99
CHD8Q9HCK8 AP004609.3-201ENST00000610705 1884 ntBASIC21.24■□□□□ 0.99
CHD8Q9HCK8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD8Q9HCK8 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.23■□□□□ 0.99
CHD8Q9HCK8 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHD8Q9HCK8 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CHD8Q9HCK8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CHD8Q9HCK8 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.23■□□□□ 0.99
CHD8Q9HCK8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD8Q9HCK8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD8Q9HCK8 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD8Q9HCK8 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHD8Q9HCK8 RNA5SP413-201ENST00000516373 109 ntBASIC21.23■□□□□ 0.99
CHD8Q9HCK8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHD8Q9HCK8 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD8Q9HCK8 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
CHD8Q9HCK8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHD8Q9HCK8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD8Q9HCK8 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHD8Q9HCK8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHD8Q9HCK8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.22■□□□□ 0.99
CHD8Q9HCK8 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHD8Q9HCK8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.22■□□□□ 0.99
CHD8Q9HCK8 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
CHD8Q9HCK8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.22■□□□□ 0.99
CHD8Q9HCK8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
CHD8Q9HCK8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.22■□□□□ 0.99
CHD8Q9HCK8 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD8Q9HCK8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD8Q9HCK8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD8Q9HCK8 AC007322.1-201ENST00000426983 750 ntBASIC21.21■□□□□ 0.99
CHD8Q9HCK8 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.21■□□□□ 0.99
CHD8Q9HCK8 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.21■□□□□ 0.99
CHD8Q9HCK8 AL121832.2-201ENST00000610979 668 ntBASIC21.21■□□□□ 0.99
CHD8Q9HCK8 AC139426.1-201ENST00000568218 2529 ntBASIC21.21■□□□□ 0.99
CHD8Q9HCK8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHD8Q9HCK8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHD8Q9HCK8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CHD8Q9HCK8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CHD8Q9HCK8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD8Q9HCK8 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD8Q9HCK8 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.21■□□□□ 0.99
CHD8Q9HCK8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD8Q9HCK8 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.2■□□□□ 0.98
CHD8Q9HCK8 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CHD8Q9HCK8 AC010331.1-201ENST00000611423 582 ntBASIC21.2■□□□□ 0.98
CHD8Q9HCK8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD8Q9HCK8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD8Q9HCK8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms