Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM38AQ9H6F2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM38AQ9H6F2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.88■□□□□ 0.93
TMEM38AQ9H6F2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM38AQ9H6F2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.88■□□□□ 0.93
TMEM38AQ9H6F2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TMEM38AQ9H6F2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM38AQ9H6F2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM38AQ9H6F2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM38AQ9H6F2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM38AQ9H6F2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TMEM38AQ9H6F2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
TMEM38AQ9H6F2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM38AQ9H6F2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.87■□□□□ 0.93
TMEM38AQ9H6F2 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.87■□□□□ 0.93
TMEM38AQ9H6F2 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.87■□□□□ 0.93
TMEM38AQ9H6F2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM38AQ9H6F2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM38AQ9H6F2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TMEM38AQ9H6F2 LINC00565-201ENST00000562710 2331 ntBASIC20.87■□□□□ 0.93
TMEM38AQ9H6F2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM38AQ9H6F2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM38AQ9H6F2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM38AQ9H6F2 AC103834.1-201ENST00000520383 144 ntBASIC20.87■□□□□ 0.93
TMEM38AQ9H6F2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM38AQ9H6F2 AC012354.3-201ENST00000623734 483 ntBASIC20.87■□□□□ 0.93
TMEM38AQ9H6F2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM38AQ9H6F2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.87■□□□□ 0.93
TMEM38AQ9H6F2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM38AQ9H6F2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
TMEM38AQ9H6F2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM38AQ9H6F2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM38AQ9H6F2 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM38AQ9H6F2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.86■□□□□ 0.93
TMEM38AQ9H6F2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.86■□□□□ 0.93
TMEM38AQ9H6F2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.86■□□□□ 0.93
TMEM38AQ9H6F2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
TMEM38AQ9H6F2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM38AQ9H6F2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.86■□□□□ 0.93
TMEM38AQ9H6F2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TMEM38AQ9H6F2 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM38AQ9H6F2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TMEM38AQ9H6F2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM38AQ9H6F2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM38AQ9H6F2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
TMEM38AQ9H6F2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM38AQ9H6F2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TMEM38AQ9H6F2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.85■□□□□ 0.93
TMEM38AQ9H6F2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM38AQ9H6F2 AC144652.1-201ENST00000609974 1624 ntBASIC20.85■□□□□ 0.93
TMEM38AQ9H6F2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
TMEM38AQ9H6F2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.85■□□□□ 0.93
TMEM38AQ9H6F2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM38AQ9H6F2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.85■□□□□ 0.93
TMEM38AQ9H6F2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM38AQ9H6F2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.84■□□□□ 0.93
TMEM38AQ9H6F2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM38AQ9H6F2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM38AQ9H6F2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
TMEM38AQ9H6F2 AC137630.3-201ENST00000607245 391 ntBASIC20.84■□□□□ 0.93
TMEM38AQ9H6F2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM38AQ9H6F2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM38AQ9H6F2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.84■□□□□ 0.93
TMEM38AQ9H6F2 AC103724.3-201ENST00000564481 992 ntBASIC20.83■□□□□ 0.93
TMEM38AQ9H6F2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.83■□□□□ 0.93
TMEM38AQ9H6F2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.83■□□□□ 0.93
TMEM38AQ9H6F2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TMEM38AQ9H6F2 CLDN5-201ENST00000403084 2357 ntBASIC20.83■□□□□ 0.93
TMEM38AQ9H6F2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TMEM38AQ9H6F2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
TMEM38AQ9H6F2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TMEM38AQ9H6F2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM38AQ9H6F2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM38AQ9H6F2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM38AQ9H6F2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TMEM38AQ9H6F2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM38AQ9H6F2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM38AQ9H6F2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM38AQ9H6F2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM38AQ9H6F2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.82■□□□□ 0.92
TMEM38AQ9H6F2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM38AQ9H6F2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
TMEM38AQ9H6F2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
TMEM38AQ9H6F2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.82■□□□□ 0.92
TMEM38AQ9H6F2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM38AQ9H6F2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM38AQ9H6F2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM38AQ9H6F2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM38AQ9H6F2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TMEM38AQ9H6F2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.82■□□□□ 0.92
TMEM38AQ9H6F2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.82■□□□□ 0.92
TMEM38AQ9H6F2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM38AQ9H6F2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.82■□□□□ 0.92
TMEM38AQ9H6F2 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMEM38AQ9H6F2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM38AQ9H6F2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM38AQ9H6F2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
TMEM38AQ9H6F2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM38AQ9H6F2 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMEM38AQ9H6F2 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms