Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CDCP1Q9H5V8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CDCP1Q9H5V8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDCP1Q9H5V8 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDCP1Q9H5V8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CDCP1Q9H5V8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.82■□□□□ 0.92
CDCP1Q9H5V8 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDCP1Q9H5V8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.82■□□□□ 0.92
CDCP1Q9H5V8 EDA-201ENST00000338901 1233 ntBASIC20.82■□□□□ 0.92
CDCP1Q9H5V8 AC006455.2-201ENST00000429931 906 ntBASIC20.82■□□□□ 0.92
CDCP1Q9H5V8 AL355001.2-201ENST00000620617 1191 ntBASIC20.82■□□□□ 0.92
CDCP1Q9H5V8 AC009086.3-201ENST00000623486 1008 ntBASIC20.82■□□□□ 0.92
CDCP1Q9H5V8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CDCP1Q9H5V8 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDCP1Q9H5V8 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.82■□□□□ 0.92
CDCP1Q9H5V8 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDCP1Q9H5V8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDCP1Q9H5V8 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDCP1Q9H5V8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.81■□□□□ 0.92
CDCP1Q9H5V8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDCP1Q9H5V8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.81■□□□□ 0.92
CDCP1Q9H5V8 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDCP1Q9H5V8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.81■□□□□ 0.92
CDCP1Q9H5V8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
CDCP1Q9H5V8 AL031432.3-201ENST00000607698 485 ntBASIC20.81■□□□□ 0.92
CDCP1Q9H5V8 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.81■□□□□ 0.92
CDCP1Q9H5V8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.81■□□□□ 0.92
CDCP1Q9H5V8 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.81■□□□□ 0.92
CDCP1Q9H5V8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CDCP1Q9H5V8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CDCP1Q9H5V8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDCP1Q9H5V8 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDCP1Q9H5V8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDCP1Q9H5V8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDCP1Q9H5V8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.8■□□□□ 0.92
CDCP1Q9H5V8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDCP1Q9H5V8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDCP1Q9H5V8 SUDS3P1-201ENST00000505831 966 ntBASIC20.8■□□□□ 0.92
CDCP1Q9H5V8 MIR4767-201ENST00000582827 78 ntBASIC20.8■□□□□ 0.92
CDCP1Q9H5V8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.8■□□□□ 0.92
CDCP1Q9H5V8 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDCP1Q9H5V8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDCP1Q9H5V8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDCP1Q9H5V8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDCP1Q9H5V8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.8■□□□□ 0.92
CDCP1Q9H5V8 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDCP1Q9H5V8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CDCP1Q9H5V8 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDCP1Q9H5V8 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDCP1Q9H5V8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDCP1Q9H5V8 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.79■□□□□ 0.92
CDCP1Q9H5V8 AL138724.1-201ENST00000606771 1088 ntBASIC20.79■□□□□ 0.92
CDCP1Q9H5V8 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCP1Q9H5V8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCP1Q9H5V8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CDCP1Q9H5V8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCP1Q9H5V8 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCP1Q9H5V8 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.78■□□□□ 0.92
CDCP1Q9H5V8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCP1Q9H5V8 MIR935-201ENST00000401179 91 ntBASIC20.78■□□□□ 0.92
CDCP1Q9H5V8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDCP1Q9H5V8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.78■□□□□ 0.92
CDCP1Q9H5V8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.78■□□□□ 0.92
CDCP1Q9H5V8 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CDCP1Q9H5V8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCP1Q9H5V8 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
CDCP1Q9H5V8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CDCP1Q9H5V8 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.78■□□□□ 0.92
CDCP1Q9H5V8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDCP1Q9H5V8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDCP1Q9H5V8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDCP1Q9H5V8 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.77■□□□□ 0.92
CDCP1Q9H5V8 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.77■□□□□ 0.92
CDCP1Q9H5V8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDCP1Q9H5V8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDCP1Q9H5V8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDCP1Q9H5V8 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.77■□□□□ 0.92
CDCP1Q9H5V8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.77■□□□□ 0.92
CDCP1Q9H5V8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.77■□□□□ 0.92
CDCP1Q9H5V8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.77■□□□□ 0.92
CDCP1Q9H5V8 AC011298.3-201ENST00000615796 283 ntBASIC20.77■□□□□ 0.92
CDCP1Q9H5V8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDCP1Q9H5V8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDCP1Q9H5V8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CDCP1Q9H5V8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDCP1Q9H5V8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDCP1Q9H5V8 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDCP1Q9H5V8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDCP1Q9H5V8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.76■□□□□ 0.91
CDCP1Q9H5V8 MIR3181-201ENST00000578512 73 ntBASIC20.76■□□□□ 0.91
CDCP1Q9H5V8 pRNA.6-201ENST00000610482 90 ntBASIC20.76■□□□□ 0.91
CDCP1Q9H5V8 pRNA.5-201ENST00000612139 90 ntBASIC20.76■□□□□ 0.91
CDCP1Q9H5V8 pRNA.11-201ENST00000618423 90 ntBASIC20.76■□□□□ 0.91
CDCP1Q9H5V8 pRNA.13-201ENST00000619112 90 ntBASIC20.76■□□□□ 0.91
CDCP1Q9H5V8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.76■□□□□ 0.91
CDCP1Q9H5V8 AC004812.2-201ENST00000611079 2094 ntBASIC20.76■□□□□ 0.91
CDCP1Q9H5V8 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDCP1Q9H5V8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CDCP1Q9H5V8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDCP1Q9H5V8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms