Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS11Q9H270 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC22.49■■□□□ 1.19
VPS11Q9H270 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
VPS11Q9H270 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
VPS11Q9H270 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
VPS11Q9H270 ESRRAP2-201ENST00000418437 1549 ntBASIC22.49■■□□□ 1.19
VPS11Q9H270 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
VPS11Q9H270 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.49■■□□□ 1.19
VPS11Q9H270 BHLHE23-202ENST00000612929 1109 ntBASIC22.49■■□□□ 1.19
VPS11Q9H270 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VPS11Q9H270 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
VPS11Q9H270 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.48■■□□□ 1.19
VPS11Q9H270 AC242852.2-201ENST00000615738 1807 ntBASIC22.48■■□□□ 1.19
VPS11Q9H270 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.48■■□□□ 1.19
VPS11Q9H270 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VPS11Q9H270 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
VPS11Q9H270 ABHD17AP5-201ENST00000580133 923 ntBASIC22.48■■□□□ 1.19
VPS11Q9H270 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VPS11Q9H270 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VPS11Q9H270 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.48■■□□□ 1.19
VPS11Q9H270 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
VPS11Q9H270 AC120024.1-201ENST00000562672 995 ntBASIC22.47■■□□□ 1.19
VPS11Q9H270 NTF6A-201ENST00000591175 560 ntBASIC22.47■■□□□ 1.19
VPS11Q9H270 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
VPS11Q9H270 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.47■■□□□ 1.19
VPS11Q9H270 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.47■■□□□ 1.19
VPS11Q9H270 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
VPS11Q9H270 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
VPS11Q9H270 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.47■■□□□ 1.19
VPS11Q9H270 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.47■■□□□ 1.19
VPS11Q9H270 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
VPS11Q9H270 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VPS11Q9H270 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
VPS11Q9H270 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VPS11Q9H270 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
VPS11Q9H270 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.46■■□□□ 1.19
VPS11Q9H270 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
VPS11Q9H270 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
VPS11Q9H270 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.19
VPS11Q9H270 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
VPS11Q9H270 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
VPS11Q9H270 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.45■■□□□ 1.18
VPS11Q9H270 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.45■■□□□ 1.18
VPS11Q9H270 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
VPS11Q9H270 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
VPS11Q9H270 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
VPS11Q9H270 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.45■■□□□ 1.18
VPS11Q9H270 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
VPS11Q9H270 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.45■■□□□ 1.18
VPS11Q9H270 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
VPS11Q9H270 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.44■■□□□ 1.18
VPS11Q9H270 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
VPS11Q9H270 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.44■■□□□ 1.18
VPS11Q9H270 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.44■■□□□ 1.18
VPS11Q9H270 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
VPS11Q9H270 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
VPS11Q9H270 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
VPS11Q9H270 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
VPS11Q9H270 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
VPS11Q9H270 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
VPS11Q9H270 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.43■■□□□ 1.18
VPS11Q9H270 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
VPS11Q9H270 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
VPS11Q9H270 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.42■■□□□ 1.18
VPS11Q9H270 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
VPS11Q9H270 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.42■■□□□ 1.18
VPS11Q9H270 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
VPS11Q9H270 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.42■■□□□ 1.18
VPS11Q9H270 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.42■■□□□ 1.18
VPS11Q9H270 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
VPS11Q9H270 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
VPS11Q9H270 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
VPS11Q9H270 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
VPS11Q9H270 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
VPS11Q9H270 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
VPS11Q9H270 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
VPS11Q9H270 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
VPS11Q9H270 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.41■■□□□ 1.18
VPS11Q9H270 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
VPS11Q9H270 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
VPS11Q9H270 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.41■■□□□ 1.18
VPS11Q9H270 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
VPS11Q9H270 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
VPS11Q9H270 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS11Q9H270 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.4■■□□□ 1.18
VPS11Q9H270 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
VPS11Q9H270 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
VPS11Q9H270 AC007375.3-201ENST00000600936 2314 ntBASIC22.4■■□□□ 1.18
VPS11Q9H270 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS11Q9H270 AC004987.1-201ENST00000428627 508 ntBASIC22.4■■□□□ 1.18
VPS11Q9H270 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.4■■□□□ 1.18
VPS11Q9H270 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
VPS11Q9H270 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS11Q9H270 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
VPS11Q9H270 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS11Q9H270 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
VPS11Q9H270 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS11Q9H270 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
VPS11Q9H270 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
VPS11Q9H270 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms