Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
SLIRPQ9GZT3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLIRPQ9GZT3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SLIRPQ9GZT3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLIRPQ9GZT3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLIRPQ9GZT3 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLIRPQ9GZT3 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SLIRPQ9GZT3 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLIRPQ9GZT3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLIRPQ9GZT3 AC010542.4-201ENST00000563151 1910 ntBASIC19.77■□□□□ 0.76
SLIRPQ9GZT3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLIRPQ9GZT3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLIRPQ9GZT3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SLIRPQ9GZT3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLIRPQ9GZT3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
SLIRPQ9GZT3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SLIRPQ9GZT3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SLIRPQ9GZT3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SLIRPQ9GZT3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLIRPQ9GZT3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLIRPQ9GZT3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLIRPQ9GZT3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLIRPQ9GZT3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLIRPQ9GZT3 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC19.76■□□□□ 0.75
SLIRPQ9GZT3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLIRPQ9GZT3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.76■□□□□ 0.75
SLIRPQ9GZT3 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLIRPQ9GZT3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLIRPQ9GZT3 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLIRPQ9GZT3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLIRPQ9GZT3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLIRPQ9GZT3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLIRPQ9GZT3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SLIRPQ9GZT3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SLIRPQ9GZT3 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SLIRPQ9GZT3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLIRPQ9GZT3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLIRPQ9GZT3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLIRPQ9GZT3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLIRPQ9GZT3 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLIRPQ9GZT3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLIRPQ9GZT3 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC19.75■□□□□ 0.75
SLIRPQ9GZT3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.75■□□□□ 0.75
SLIRPQ9GZT3 AC126177.7-201ENST00000547904 679 ntBASIC19.75■□□□□ 0.75
SLIRPQ9GZT3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SLIRPQ9GZT3 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
SLIRPQ9GZT3 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLIRPQ9GZT3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SLIRPQ9GZT3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SLIRPQ9GZT3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SLIRPQ9GZT3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.74■□□□□ 0.75
SLIRPQ9GZT3 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLIRPQ9GZT3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLIRPQ9GZT3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLIRPQ9GZT3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.73■□□□□ 0.75
SLIRPQ9GZT3 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLIRPQ9GZT3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.73■□□□□ 0.75
SLIRPQ9GZT3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLIRPQ9GZT3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.73■□□□□ 0.75
SLIRPQ9GZT3 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLIRPQ9GZT3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.73■□□□□ 0.75
SLIRPQ9GZT3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLIRPQ9GZT3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLIRPQ9GZT3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SLIRPQ9GZT3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SLIRPQ9GZT3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLIRPQ9GZT3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.73■□□□□ 0.75
SLIRPQ9GZT3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLIRPQ9GZT3 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SLIRPQ9GZT3 AL157384.1-201ENST00000445995 2473 ntBASIC19.73■□□□□ 0.75
SLIRPQ9GZT3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLIRPQ9GZT3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.72■□□□□ 0.75
SLIRPQ9GZT3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLIRPQ9GZT3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLIRPQ9GZT3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLIRPQ9GZT3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SLIRPQ9GZT3 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SLIRPQ9GZT3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
SLIRPQ9GZT3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLIRPQ9GZT3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.71■□□□□ 0.75
SLIRPQ9GZT3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SLIRPQ9GZT3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLIRPQ9GZT3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLIRPQ9GZT3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
SLIRPQ9GZT3 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SLIRPQ9GZT3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLIRPQ9GZT3 DUX4L13-201ENST00000554103 1267 ntBASIC19.71■□□□□ 0.75
SLIRPQ9GZT3 DUX4L15-201ENST00000611059 1267 ntBASIC19.71■□□□□ 0.75
SLIRPQ9GZT3 DUX4L23-201ENST00000615195 1269 ntBASIC19.71■□□□□ 0.75
SLIRPQ9GZT3 DUX4L24-201ENST00000617576 1269 ntBASIC19.71■□□□□ 0.75
SLIRPQ9GZT3 DUX4L22-201ENST00000618238 1269 ntBASIC19.71■□□□□ 0.75
SLIRPQ9GZT3 DUX4L20-201ENST00000619712 1269 ntBASIC19.71■□□□□ 0.75
SLIRPQ9GZT3 DUX4L21-201ENST00000622058 1269 ntBASIC19.71■□□□□ 0.75
SLIRPQ9GZT3 DUX4L10-201ENST00000622460 1267 ntBASIC19.71■□□□□ 0.75
SLIRPQ9GZT3 DUX4L25-201ENST00000624915 1269 ntBASIC19.71■□□□□ 0.75
SLIRPQ9GZT3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLIRPQ9GZT3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLIRPQ9GZT3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.7■□□□□ 0.74
SLIRPQ9GZT3 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLIRPQ9GZT3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms